Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Gm13186-201ENSMUST00000118031 316 ntBASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Gm18669-201ENSMUST00000216049 778 ntBASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-42A0A0A6YY38 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Gm11336-201ENSMUST00000118168 334 ntBASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-42A0A0A6YY38 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Gm27357-201ENSMUST00000183754 135 ntBASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Gm28033-201ENSMUST00000184224 96 ntBASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-42A0A0A6YY38 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-42A0A0A6YY38 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.71■□□□□ 0.11
Ighv1-42A0A0A6YY38 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-42A0A0A6YY38 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-42A0A0A6YY38 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-42A0A0A6YY38 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ighv1-42A0A0A6YY38 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-42A0A0A6YY38 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ighv1-42A0A0A6YY38 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-42A0A0A6YY38 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-42A0A0A6YY38 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-42A0A0A6YY38 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-42A0A0A6YY38 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv1-42A0A0A6YY38 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv1-42A0A0A6YY38 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv1-42A0A0A6YY38 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv1-42A0A0A6YY38 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms