Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-5A0A075B6B9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-5A0A075B6B9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.77□□□□□ -0.2
Trav6d-5A0A075B6B9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6d-5A0A075B6B9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6d-5A0A075B6B9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trav6d-5A0A075B6B9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms