Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12d-3A0A075B6A4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12d-3A0A075B6A4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12d-3A0A075B6A4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12d-3A0A075B6A4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12d-3A0A075B6A4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12d-3A0A075B6A4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12d-3A0A075B6A4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12d-3A0A075B6A4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav12d-3A0A075B6A4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12d-3A0A075B6A4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav12d-3A0A075B6A4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12d-3A0A075B6A4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12d-3A0A075B6A4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12d-3A0A075B6A4 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Gm11421-201ENSMUST00000122124 294 ntBASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.76□□□□□ -0.37
Trav12d-3A0A075B6A4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms