Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm37374-201ENSMUST00000194954 1829 ntBASIC11.55□□□□□ -0.56
Trav3-4A0A075B654 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-4A0A075B654 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav3-4A0A075B654 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-4A0A075B654 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
Trav3-4A0A075B654 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-4A0A075B654 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-4A0A075B654 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-4A0A075B654 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3-4A0A075B654 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav3-4A0A075B654 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav3-4A0A075B654 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-4A0A075B654 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-4A0A075B654 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-4A0A075B654 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-4A0A075B654 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-4A0A075B654 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Trav3-4A0A075B654 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-4A0A075B654 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-4A0A075B654 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-4A0A075B654 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-4A0A075B654 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Gm16401-202ENSMUST00000197463 2074 ntBASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms