Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4-2A0A075B638 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4-2A0A075B638 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Zfp783-201ENSMUST00000095946 670 ntBASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4-2A0A075B638 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav4-2A0A075B638 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav4-2A0A075B638 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav4-2A0A075B638 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav4-2A0A075B638 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav4-2A0A075B638 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav4-2A0A075B638 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav4-2A0A075B638 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav4-2A0A075B638 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-2A0A075B638 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-2A0A075B638 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-2A0A075B638 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-2A0A075B638 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-2A0A075B638 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-2A0A075B638 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-2A0A075B638 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-2A0A075B638 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-2A0A075B638 Gm42778-201ENSMUST00000199644 553 ntBASIC13.51□□□□□ -0.25
Trav4-2A0A075B638 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav4-2A0A075B638 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav4-2A0A075B638 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms