Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Gm12895-201ENSMUST00000122214 226 ntBASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav8n-2A0A075B633 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8n-2A0A075B633 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Gm27000-201ENSMUST00000182943 842 ntBASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8n-2A0A075B633 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav8n-2A0A075B633 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
Trav8n-2A0A075B633 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Gm13884-201ENSMUST00000118103 829 ntBASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav8n-2A0A075B633 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Gm13186-201ENSMUST00000118031 316 ntBASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Gm10052-201ENSMUST00000168019 960 ntBASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8n-2A0A075B633 Gm7729-201ENSMUST00000050143 801 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms