Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6n-5A0A075B621 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Gm38285-201ENSMUST00000192928 922 ntBASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav6n-5A0A075B621 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms