Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm34139-201ENSMUST00000196166 294 ntBASIC3.74□□□□□ -1.81
Trim39Q9ESN2 Gm44338-201ENSMUST00000198614 110 ntBASIC3.74□□□□□ -1.81
Trim39Q9ESN2 Gm19244-201ENSMUST00000204340 253 ntBASIC3.74□□□□□ -1.81
Trim39Q9ESN2 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.74□□□□□ -1.81
Trim39Q9ESN2 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim39Q9ESN2 Gm22978-201ENSMUST00000082607 160 ntBASIC3.74□□□□□ -1.81
Trim39Q9ESN2 Gm22443-201ENSMUST00000082890 107 ntBASIC3.74□□□□□ -1.81
Trim39Q9ESN2 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim39Q9ESN2 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim39Q9ESN2 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim39Q9ESN2 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Gm24283-201ENSMUST00000104233 107 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Gm25726-201ENSMUST00000104529 129 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Gm12173-201ENSMUST00000117622 273 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Gm12190-201ENSMUST00000120001 187 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Gm13801-201ENSMUST00000120750 160 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Gm22560-201ENSMUST00000157332 120 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Gm25913-201ENSMUST00000157617 135 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Gm24213-201ENSMUST00000158255 258 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Gm25369-201ENSMUST00000158848 132 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Trbv18-201ENSMUST00000194256 294 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Gm22245-201ENSMUST00000082479 103 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.73□□□□□ -1.81
Trim39Q9ESN2 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Gm24096-201ENSMUST00000103905 110 ntBASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Gm22778-201ENSMUST00000104090 128 ntBASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Gm8666-201ENSMUST00000117517 292 ntBASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Gm23023-201ENSMUST00000158767 109 ntBASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Mir6399-201ENSMUST00000184050 84 ntBASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Gm37300-201ENSMUST00000193327 280 ntBASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Gm3829-201ENSMUST00000222362 619 ntBASIC3.72□□□□□ -1.81
Trim39Q9ESN2 CT030645.1-201ENSMUST00000224020 231 ntBASIC3.72□□□□□ -1.81
Trim39Q9ESN2 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.72□□□□□ -1.81
Trim39Q9ESN2 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.72□□□□□ -1.81
Trim39Q9ESN2 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Gm23928-201ENSMUST00000082469 145 ntBASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Gm22248-201ENSMUST00000082482 150 ntBASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trim39Q9ESN2 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Trim39Q9ESN2 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Mir761-201ENSMUST00000103245 76 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Snora64-201ENSMUST00000104521 134 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm12449-201ENSMUST00000117572 234 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm13478-201ENSMUST00000118312 413 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm12143-201ENSMUST00000119666 332 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm24892-201ENSMUST00000122747 104 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm25267-201ENSMUST00000158522 63 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm22775-201ENSMUST00000177630 120 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm17522-201ENSMUST00000178144 498 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm23569-201ENSMUST00000180120 120 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm19620-201ENSMUST00000195972 434 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm5010-201ENSMUST00000213131 260 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm25147-201ENSMUST00000083030 105 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Snord22-201ENSMUST00000083153 126 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm25136-201ENSMUST00000083253 115 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Gm23727-201ENSMUST00000083352 164 ntBASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim39Q9ESN2 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 169.5 ms