Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Gm24818-201ENSMUST00000175093 161 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Gm24811-201ENSMUST00000175313 100 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Gm20651-201ENSMUST00000177219 329 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Gm25450-201ENSMUST00000179144 107 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Gm6660-201ENSMUST00000179149 468 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Gm28744-201ENSMUST00000189939 340 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Gm37713-201ENSMUST00000191746 198 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Gm4945-201ENSMUST00000075152 453 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Gm22620-201ENSMUST00000082700 133 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Gm22358-201ENSMUST00000082877 122 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Gm22970-201ENSMUST00000083304 186 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Gm25188-201ENSMUST00000083913 122 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.27□□□□□ -1.89
Cldnd1Q9CQX5 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm24079-201ENSMUST00000104352 132 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm15002-201ENSMUST00000118406 452 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm11572-201ENSMUST00000119164 120 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm22447-201ENSMUST00000158155 92 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm24681-201ENSMUST00000158760 107 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm10075-201ENSMUST00000162030 545 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Mir5136-201ENSMUST00000175573 76 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm23355-201ENSMUST00000177614 107 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm23148-201ENSMUST00000180367 107 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Mir6481-201ENSMUST00000184617 110 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm37746-201ENSMUST00000193249 198 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Trbv7-201ENSMUST00000193339 402 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 AC145736.2-201ENSMUST00000216305 365 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm25258-201ENSMUST00000083049 107 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Mir32-201ENSMUST00000083610 70 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm26314-201ENSMUST00000083891 107 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm10242-201ENSMUST00000090064 330 ntBASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Cldnd1Q9CQX5 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 Gm13729-201ENSMUST00000120328 406 ntBASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 Mir6715-201ENSMUST00000184990 57 ntBASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 Mir3535-201ENSMUST00000197651 147 ntBASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 AC173482.4-201ENSMUST00000225096 348 ntBASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 Gm25078-201ENSMUST00000082530 107 ntBASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Cldnd1Q9CQX5 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Gm15714-201ENSMUST00000117168 250 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Gm12617-201ENSMUST00000121268 381 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Gm25333-201ENSMUST00000158035 246 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Gm23963-201ENSMUST00000179603 77 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Gm27445-201ENSMUST00000184484 72 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Gm29602-201ENSMUST00000186887 442 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Gm28921-201ENSMUST00000190219 378 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Gm37290-201ENSMUST00000195775 339 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Gm43521-201ENSMUST00000197838 255 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Gm43107-201ENSMUST00000198729 255 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Gm42578-201ENSMUST00000199960 194 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Gm40810-201ENSMUST00000219149 253 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Gm22507-201ENSMUST00000082773 160 ntBASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Cldnd1Q9CQX5 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cldnd1Q9CQX5 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cldnd1Q9CQX5 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.23□□□□□ -1.89
Cldnd1Q9CQX5 Gm26387-201ENSMUST00000104238 132 ntBASIC3.23□□□□□ -1.89
Cldnd1Q9CQX5 Gm25875-201ENSMUST00000104323 107 ntBASIC3.23□□□□□ -1.89
Cldnd1Q9CQX5 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.23□□□□□ -1.89
Cldnd1Q9CQX5 Gm12686-201ENSMUST00000120546 397 ntBASIC3.23□□□□□ -1.89
Cldnd1Q9CQX5 Gm44977-201ENSMUST00000205283 420 ntBASIC3.23□□□□□ -1.89
Cldnd1Q9CQX5 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.23□□□□□ -1.89
Cldnd1Q9CQX5 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms