Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm23476-201ENSMUST00000158881 274 ntBASIC4.02□□□□□ -1.77
Clp1Q99LI9 Gm23571-201ENSMUST00000180073 127 ntBASIC4.02□□□□□ -1.77
Clp1Q99LI9 Gm27271-201ENSMUST00000183509 170 ntBASIC4.02□□□□□ -1.77
Clp1Q99LI9 Gm27249-201ENSMUST00000185049 328 ntBASIC4.02□□□□□ -1.77
Clp1Q99LI9 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Clp1Q99LI9 Gm44385-201ENSMUST00000198781 81 ntBASIC4.02□□□□□ -1.77
Clp1Q99LI9 Gm43217-201ENSMUST00000199513 367 ntBASIC4.02□□□□□ -1.77
Clp1Q99LI9 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Clp1Q99LI9 AC160863.1-201ENSMUST00000218412 317 ntBASIC4.02□□□□□ -1.77
Clp1Q99LI9 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.02□□□□□ -1.77
Clp1Q99LI9 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.02□□□□□ -1.77
Clp1Q99LI9 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Clp1Q99LI9 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Clp1Q99LI9 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Clp1Q99LI9 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Clp1Q99LI9 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Clp1Q99LI9 Gm37479-201ENSMUST00000194169 3841 ntBASIC4.02□□□□□ -1.77
Clp1Q99LI9 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Clp1Q99LI9 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Clp1Q99LI9 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Clp1Q99LI9 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Clp1Q99LI9 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Clp1Q99LI9 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 Gm23532-201ENSMUST00000104569 112 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 Gm14973-201ENSMUST00000117248 255 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 Gm12722-201ENSMUST00000118507 493 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 Mir1967-201ENSMUST00000157789 82 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 Gm25860-201ENSMUST00000158252 126 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 Gm22767-201ENSMUST00000158365 165 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 Gm17528-201ENSMUST00000171026 239 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 Gm22192-201ENSMUST00000175128 85 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.01□□□□□ -1.77
Clp1Q99LI9 Gm27753-201ENSMUST00000184742 203 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 Gm28591-201ENSMUST00000185259 183 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC4.01□□□□□ -1.77
Clp1Q99LI9 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Clp1Q99LI9 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 Gm43746-201ENSMUST00000200028 317 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Clp1Q99LI9 Gm25800-201ENSMUST00000082636 134 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 Gm25632-201ENSMUST00000083112 85 ntBASIC4.01□□□□□ -1.77
Clp1Q99LI9 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Clp1Q99LI9 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Clp1Q99LI9 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Clp1Q99LI9 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Clp1Q99LI9 Gm24067-201ENSMUST00000104514 85 ntBASIC4□□□□□ -1.77
Clp1Q99LI9 Gm12304-201ENSMUST00000120312 385 ntBASIC4□□□□□ -1.77
Clp1Q99LI9 Gm16005-201ENSMUST00000120515 269 ntBASIC4□□□□□ -1.77
Clp1Q99LI9 Gm22337-201ENSMUST00000157721 132 ntBASIC4□□□□□ -1.77
Clp1Q99LI9 Gm26141-201ENSMUST00000175299 126 ntBASIC4□□□□□ -1.77
Clp1Q99LI9 Gm21960-201ENSMUST00000181924 452 ntBASIC4□□□□□ -1.77
Clp1Q99LI9 Mir6993-201ENSMUST00000184912 65 ntBASIC4□□□□□ -1.77
Clp1Q99LI9 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4□□□□□ -1.77
Clp1Q99LI9 Gm45778-201ENSMUST00000211959 153 ntBASIC4□□□□□ -1.77
Clp1Q99LI9 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC4□□□□□ -1.77
Clp1Q99LI9 AC122484.1-201ENSMUST00000221578 177 ntBASIC4□□□□□ -1.77
Clp1Q99LI9 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC4□□□□□ -1.77
Clp1Q99LI9 Gm37345-201ENSMUST00000193062 3138 ntBASIC4□□□□□ -1.77
Clp1Q99LI9 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Clp1Q99LI9 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Clp1Q99LI9 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
Clp1Q99LI9 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Clp1Q99LI9 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Clp1Q99LI9 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Clp1Q99LI9 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Clp1Q99LI9 Gm12512-201ENSMUST00000119620 217 ntBASIC3.99□□□□□ -1.77
Clp1Q99LI9 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.99□□□□□ -1.77
Clp1Q99LI9 Gm24878-201ENSMUST00000158782 104 ntBASIC3.99□□□□□ -1.77
Clp1Q99LI9 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.99□□□□□ -1.77
Clp1Q99LI9 Mir6399-201ENSMUST00000184050 84 ntBASIC3.99□□□□□ -1.77
Clp1Q99LI9 Gm2189-201ENSMUST00000201419 429 ntBASIC3.99□□□□□ -1.77
Clp1Q99LI9 Gm36776-201ENSMUST00000207006 203 ntBASIC3.99□□□□□ -1.77
Clp1Q99LI9 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.99□□□□□ -1.77
Clp1Q99LI9 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.99□□□□□ -1.77
Clp1Q99LI9 Snord15a-201ENSMUST00000083888 148 ntBASIC3.99□□□□□ -1.77
Clp1Q99LI9 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
Clp1Q99LI9 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Clp1Q99LI9 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Clp1Q99LI9 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Clp1Q99LI9 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Clp1Q99LI9 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Clp1Q99LI9 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Clp1Q99LI9 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Clp1Q99LI9 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Clp1Q99LI9 Gm24132-201ENSMUST00000104745 91 ntBASIC3.98□□□□□ -1.77
Clp1Q99LI9 Gm26476-201ENSMUST00000122618 313 ntBASIC3.98□□□□□ -1.77
Clp1Q99LI9 Gm24892-201ENSMUST00000122747 104 ntBASIC3.98□□□□□ -1.77
Clp1Q99LI9 Gm25051-201ENSMUST00000158602 249 ntBASIC3.98□□□□□ -1.77
Clp1Q99LI9 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.98□□□□□ -1.77
Clp1Q99LI9 Gm17166-201ENSMUST00000172006 431 ntBASIC3.98□□□□□ -1.77
Clp1Q99LI9 Gm20399-201ENSMUST00000174652 132 ntBASIC3.98□□□□□ -1.77
Clp1Q99LI9 Gm27903-201ENSMUST00000175482 126 ntBASIC3.98□□□□□ -1.77
Clp1Q99LI9 Gm24388-201ENSMUST00000177872 107 ntBASIC3.98□□□□□ -1.77
Clp1Q99LI9 Gm25935-201ENSMUST00000178746 107 ntBASIC3.98□□□□□ -1.77
Clp1Q99LI9 Mir7062-201ENSMUST00000185038 66 ntBASIC3.98□□□□□ -1.77
Clp1Q99LI9 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.98□□□□□ -1.77
Clp1Q99LI9 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Clp1Q99LI9 Gm20144-201ENSMUST00000203031 165 ntBASIC3.98□□□□□ -1.77
Clp1Q99LI9 Gm22978-201ENSMUST00000082607 160 ntBASIC3.98□□□□□ -1.77
Clp1Q99LI9 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms