Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm29627-201ENSMUST00000187984 463 ntBASIC1.29□□□□□ -2.2
Lsm1Q8VC85 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Lsm1Q8VC85 Gm42774-201ENSMUST00000198854 283 ntBASIC1.29□□□□□ -2.2
Lsm1Q8VC85 Mir1291-201ENSMUST00000199842 117 ntBASIC1.29□□□□□ -2.2
Lsm1Q8VC85 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Lsm1Q8VC85 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Lsm1Q8VC85 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm14882-201ENSMUST00000117216 218 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm12053-201ENSMUST00000119022 252 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm14887-201ENSMUST00000119522 663 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm12309-201ENSMUST00000119889 182 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm23752-201ENSMUST00000157584 115 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm22186-201ENSMUST00000157822 122 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm15914-201ENSMUST00000161922 309 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm24464-201ENSMUST00000179697 107 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Mir7225-201ENSMUST00000184178 54 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Mir7050-201ENSMUST00000184636 60 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm21064-202ENSMUST00000190583 278 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm42925-201ENSMUST00000197359 285 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm43680-201ENSMUST00000199466 340 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm45382-201ENSMUST00000210607 151 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 AC102352.1-201ENSMUST00000224187 582 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 Gm23516-201ENSMUST00000093728 107 ntBASIC1.28□□□□□ -2.2
Lsm1Q8VC85 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.27□□□□□ -2.21
Lsm1Q8VC85 Gm14551-201ENSMUST00000120802 256 ntBASIC1.27□□□□□ -2.21
Lsm1Q8VC85 Gm23068-201ENSMUST00000158239 293 ntBASIC1.27□□□□□ -2.21
Lsm1Q8VC85 Gm24885-201ENSMUST00000158783 270 ntBASIC1.27□□□□□ -2.21
Lsm1Q8VC85 Gm21673-201ENSMUST00000186640 436 ntBASIC1.27□□□□□ -2.21
Lsm1Q8VC85 Gm21135-201ENSMUST00000189023 436 ntBASIC1.27□□□□□ -2.21
Lsm1Q8VC85 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.27□□□□□ -2.21
Lsm1Q8VC85 Gm44654-201ENSMUST00000208052 329 ntBASIC1.27□□□□□ -2.21
Lsm1Q8VC85 Gm18242-201ENSMUST00000218455 542 ntBASIC1.27□□□□□ -2.21
Lsm1Q8VC85 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Lsm1Q8VC85 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.27□□□□□ -2.21
Lsm1Q8VC85 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.27□□□□□ -2.21
Lsm1Q8VC85 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Lsm1Q8VC85 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.27□□□□□ -2.21
Lsm1Q8VC85 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Lsm1Q8VC85 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Lsm1Q8VC85 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Gm14624-201ENSMUST00000117746 192 ntBASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Gm23122-201ENSMUST00000157645 103 ntBASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Gm22099-201ENSMUST00000157925 123 ntBASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Gm22537-201ENSMUST00000158172 199 ntBASIC1.26□□□□□ -2.21
Lsm1Q8VC85 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Gm28439-201ENSMUST00000187714 876 ntBASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.26□□□□□ -2.21
Lsm1Q8VC85 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Lsm1Q8VC85 Mir301b-201ENSMUST00000102333 97 ntBASIC1.25□□□□□ -2.21
Lsm1Q8VC85 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Lsm1Q8VC85 Gm11606-201ENSMUST00000120706 617 ntBASIC1.25□□□□□ -2.21
Lsm1Q8VC85 Gm6568-201ENSMUST00000122274 697 ntBASIC1.25□□□□□ -2.21
Lsm1Q8VC85 Gm24897-201ENSMUST00000179033 107 ntBASIC1.25□□□□□ -2.21
Lsm1Q8VC85 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.25□□□□□ -2.21
Lsm1Q8VC85 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Lsm1Q8VC85 Gm37361-201ENSMUST00000194345 132 ntBASIC1.25□□□□□ -2.21
Lsm1Q8VC85 Gm43723-201ENSMUST00000196886 189 ntBASIC1.25□□□□□ -2.21
Lsm1Q8VC85 Gm44408-201ENSMUST00000200205 66 ntBASIC1.25□□□□□ -2.21
Lsm1Q8VC85 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm22543-201ENSMUST00000104347 94 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm14823-201ENSMUST00000117698 238 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm24598-201ENSMUST00000122510 74 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm25831-201ENSMUST00000158924 163 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Traj60-201ENSMUST00000167781 54 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm21754-201ENSMUST00000177550 479 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm37162-201ENSMUST00000191708 551 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm38146-201ENSMUST00000194121 1293 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm43427-201ENSMUST00000198188 331 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm43529-201ENSMUST00000199178 412 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm44254-201ENSMUST00000204184 322 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm19032-201ENSMUST00000208584 592 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm2829-201ENSMUST00000213121 499 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm26493-201ENSMUST00000083155 136 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Mir221-201ENSMUST00000083488 95 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.24□□□□□ -2.21
Lsm1Q8VC85 Gm12639-201ENSMUST00000121400 493 ntBASIC1.23□□□□□ -2.21
Lsm1Q8VC85 Gm15365-201ENSMUST00000122392 300 ntBASIC1.23□□□□□ -2.21
Lsm1Q8VC85 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.23□□□□□ -2.21
Lsm1Q8VC85 Gm23670-201ENSMUST00000157469 119 ntBASIC1.23□□□□□ -2.21
Lsm1Q8VC85 Gm23034-201ENSMUST00000158001 147 ntBASIC1.23□□□□□ -2.21
Lsm1Q8VC85 Gm24851-201ENSMUST00000158028 103 ntBASIC1.23□□□□□ -2.21
Lsm1Q8VC85 Gm17054-201ENSMUST00000169811 259 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms