Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm44966-201ENSMUST00000208096 157 ntBASIC3.53□□□□□ -1.84
Ushbp1Q8R370 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.53□□□□□ -1.84
Ushbp1Q8R370 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.53□□□□□ -1.84
Ushbp1Q8R370 Gm46389-201ENSMUST00000223199 392 ntBASIC3.53□□□□□ -1.84
Ushbp1Q8R370 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.53□□□□□ -1.84
Ushbp1Q8R370 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
Ushbp1Q8R370 Gm26329-201ENSMUST00000093723 110 ntBASIC3.53□□□□□ -1.84
Ushbp1Q8R370 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.52□□□□□ -1.85
Ushbp1Q8R370 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Ushbp1Q8R370 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Ushbp1Q8R370 Gm15010-201ENSMUST00000117153 407 ntBASIC3.52□□□□□ -1.85
Ushbp1Q8R370 Gm11253-201ENSMUST00000118486 201 ntBASIC3.52□□□□□ -1.85
Ushbp1Q8R370 Gm25808-201ENSMUST00000122784 284 ntBASIC3.52□□□□□ -1.85
Ushbp1Q8R370 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Ushbp1Q8R370 Gm23586-201ENSMUST00000157657 123 ntBASIC3.52□□□□□ -1.85
Ushbp1Q8R370 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC3.52□□□□□ -1.85
Ushbp1Q8R370 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC3.52□□□□□ -1.85
Ushbp1Q8R370 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Ushbp1Q8R370 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.52□□□□□ -1.85
Ushbp1Q8R370 Gm44256-201ENSMUST00000203304 335 ntBASIC3.52□□□□□ -1.85
Ushbp1Q8R370 Gm18000-201ENSMUST00000212153 800 ntBASIC3.52□□□□□ -1.85
Ushbp1Q8R370 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.52□□□□□ -1.85
Ushbp1Q8R370 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.52□□□□□ -1.85
Ushbp1Q8R370 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Ushbp1Q8R370 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm24119-201ENSMUST00000103979 246 ntBASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm5937-201ENSMUST00000119715 643 ntBASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm11819-201ENSMUST00000122192 372 ntBASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm22113-201ENSMUST00000158343 104 ntBASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm23759-201ENSMUST00000158351 268 ntBASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm25162-201ENSMUST00000158906 159 ntBASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm24487-201ENSMUST00000178017 63 ntBASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Mir8096-201ENSMUST00000184526 127 ntBASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm1833-201ENSMUST00000191608 682 ntBASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm43600-201ENSMUST00000202134 223 ntBASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.51□□□□□ -1.85
Ushbp1Q8R370 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm23723-201ENSMUST00000082996 132 ntBASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Ushbp1Q8R370 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Ushbp1Q8R370 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Gm15211-201ENSMUST00000118932 528 ntBASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Gm15190-201ENSMUST00000120855 276 ntBASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Gm26477-201ENSMUST00000122617 323 ntBASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Gm20672-201ENSMUST00000176605 261 ntBASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Snora15-201ENSMUST00000177461 131 ntBASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Gm37801-201ENSMUST00000194754 274 ntBASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Gm38060-201ENSMUST00000194822 464 ntBASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Igkv15-102-201ENSMUST00000197885 287 ntBASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ushbp1Q8R370 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Ushbp1Q8R370 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ushbp1Q8R370 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm15526-201ENSMUST00000112504 204 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm13329-201ENSMUST00000117063 265 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm13504-201ENSMUST00000117490 316 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm14792-201ENSMUST00000119725 258 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm13967-201ENSMUST00000120404 380 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm16218-201ENSMUST00000155424 388 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm24213-201ENSMUST00000158255 258 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm18520-201ENSMUST00000174783 658 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm37281-201ENSMUST00000192412 439 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm18341-201ENSMUST00000197538 622 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Ushbp1Q8R370 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm26457-201ENSMUST00000082678 78 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm23517-201ENSMUST00000082830 192 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Gm23041-201ENSMUST00000083868 106 ntBASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ushbp1Q8R370 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm14448-201ENSMUST00000116383 210 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm15896-201ENSMUST00000118045 440 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm24630-201ENSMUST00000122768 106 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm26215-201ENSMUST00000158584 139 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms