Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm25333-201ENSMUST00000158035 246 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm25898-201ENSMUST00000158303 106 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm24056-201ENSMUST00000158617 146 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm25026-201ENSMUST00000175017 188 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm26378-201ENSMUST00000179093 107 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm29037-201ENSMUST00000189092 313 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm18854-201ENSMUST00000211196 329 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 AC188459.1-201ENSMUST00000216651 300 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Gm25853-201ENSMUST00000082793 132 ntBASIC0.47□□□□□ -2.33
Col6a6Q8C6K9 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC0.46□□□□□ -2.34
Col6a6Q8C6K9 Gm23531-201ENSMUST00000104567 68 ntBASIC0.46□□□□□ -2.34
Col6a6Q8C6K9 Gm14517-201ENSMUST00000119040 337 ntBASIC0.46□□□□□ -2.34
Col6a6Q8C6K9 Gm23473-201ENSMUST00000158883 116 ntBASIC0.46□□□□□ -2.34
Col6a6Q8C6K9 Gm37743-201ENSMUST00000194645 376 ntBASIC0.46□□□□□ -2.34
Col6a6Q8C6K9 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.46□□□□□ -2.34
Col6a6Q8C6K9 Mir1291-201ENSMUST00000199842 117 ntBASIC0.46□□□□□ -2.34
Col6a6Q8C6K9 Gm42739-201ENSMUST00000200687 226 ntBASIC0.46□□□□□ -2.34
Col6a6Q8C6K9 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.46□□□□□ -2.34
Col6a6Q8C6K9 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.46□□□□□ -2.34
Col6a6Q8C6K9 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
Col6a6Q8C6K9 Gm22299-201ENSMUST00000082663 136 ntBASIC0.46□□□□□ -2.34
Col6a6Q8C6K9 Gm15211-201ENSMUST00000118932 528 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Gm13359-201ENSMUST00000119000 695 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Gm23713-201ENSMUST00000157353 70 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Gm22615-201ENSMUST00000158102 70 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Gm23205-201ENSMUST00000158671 103 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Gm22802-201ENSMUST00000175621 89 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Mir6341-201ENSMUST00000183490 121 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Gm28344-201ENSMUST00000185704 279 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Gm45207-201ENSMUST00000207469 145 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Gm45730-201ENSMUST00000212560 395 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Gm23245-201ENSMUST00000083370 135 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Zfp640-202ENSMUST00000224116 1562 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Gm22757-201ENSMUST00000102279 96 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Gm25378-201ENSMUST00000104333 129 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Mir3086-201ENSMUST00000175072 87 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Gm23924-201ENSMUST00000082474 108 ntBASIC0.45□□□□□ -2.34
Col6a6Q8C6K9 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm14945-201ENSMUST00000119556 1118 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm15309-201ENSMUST00000121644 240 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm24875-201ENSMUST00000158888 104 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm25839-201ENSMUST00000158921 103 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm18635-201ENSMUST00000199020 1060 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm18645-201ENSMUST00000209593 651 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm45907-201ENSMUST00000213023 193 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 AC133076.1-201ENSMUST00000228074 484 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm23246-201ENSMUST00000083371 67 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm23431-201ENSMUST00000104006 107 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm13246-201ENSMUST00000120994 315 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm16354-201ENSMUST00000155376 150 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm26275-201ENSMUST00000157101 268 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm23036-201ENSMUST00000157885 99 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm34139-201ENSMUST00000196166 294 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm43199-201ENSMUST00000200019 307 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm24152-201ENSMUST00000082764 163 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm24948-201ENSMUST00000082866 207 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.44□□□□□ -2.34
Col6a6Q8C6K9 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm2348-201ENSMUST00000108782 300 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm15176-201ENSMUST00000117734 135 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm13454-201ENSMUST00000118166 483 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm22962-201ENSMUST00000157962 73 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm25020-201ENSMUST00000178071 107 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm16399-201ENSMUST00000181423 219 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm28912-201ENSMUST00000189001 234 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm19891-201ENSMUST00000189771 303 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm28408-201ENSMUST00000191557 463 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm37361-201ENSMUST00000194345 132 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm18340-201ENSMUST00000196342 609 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms