Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Trim47Q8C0E3 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Trim47Q8C0E3 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.4□□□□□ -1.7
Trim47Q8C0E3 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Trim47Q8C0E3 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Trim47Q8C0E3 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm14299-201ENSMUST00000117586 397 ntBASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm6071-201ENSMUST00000119561 440 ntBASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm22490-201ENSMUST00000157188 119 ntBASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm23098-201ENSMUST00000157552 299 ntBASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm26187-201ENSMUST00000157693 101 ntBASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm22889-201ENSMUST00000158639 58 ntBASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Mir713-201ENSMUST00000178651 108 ntBASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm29613-201ENSMUST00000185846 313 ntBASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm29544-201ENSMUST00000188860 313 ntBASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm28808-201ENSMUST00000190978 313 ntBASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm37097-201ENSMUST00000193676 336 ntBASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.4□□□□□ -1.71
Trim47Q8C0E3 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm22421-201ENSMUST00000083058 107 ntBASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Mir369-201ENSMUST00000083627 79 ntBASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim47Q8C0E3 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim47Q8C0E3 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Snord89-201ENSMUST00000104516 110 ntBASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm22105-201ENSMUST00000116734 116 ntBASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm23713-201ENSMUST00000157353 70 ntBASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm22615-201ENSMUST00000158102 70 ntBASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm23198-201ENSMUST00000158811 91 ntBASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm17522-201ENSMUST00000178144 498 ntBASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm29604-201ENSMUST00000187176 163 ntBASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm29167-201ENSMUST00000190024 377 ntBASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm43206-201ENSMUST00000197990 114 ntBASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Trim47Q8C0E3 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.39□□□□□ -1.71
Trim47Q8C0E3 CT009696.2-201ENSMUST00000216668 432 ntBASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Gm9218-201ENSMUST00000121068 2694 ntBASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.39□□□□□ -1.71
Trim47Q8C0E3 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Trim47Q8C0E3 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim47Q8C0E3 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim47Q8C0E3 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.38□□□□□ -1.71
Trim47Q8C0E3 Gm24894-201ENSMUST00000122744 118 ntBASIC4.38□□□□□ -1.71
Trim47Q8C0E3 n-R5s216-201ENSMUST00000122755 112 ntBASIC4.38□□□□□ -1.71
Trim47Q8C0E3 Gm27773-201ENSMUST00000184087 78 ntBASIC4.38□□□□□ -1.71
Trim47Q8C0E3 Gm4248-201ENSMUST00000196905 316 ntBASIC4.38□□□□□ -1.71
Trim47Q8C0E3 Gm9377-201ENSMUST00000207227 623 ntBASIC4.38□□□□□ -1.71
Trim47Q8C0E3 CT025579.1-201ENSMUST00000223779 366 ntBASIC4.38□□□□□ -1.71
Trim47Q8C0E3 AC122418.1-201ENSMUST00000225012 511 ntBASIC4.38□□□□□ -1.71
Trim47Q8C0E3 AC165106.2-201ENSMUST00000226749 97 ntBASIC4.38□□□□□ -1.71
Trim47Q8C0E3 Mir132-201ENSMUST00000083603 66 ntBASIC4.38□□□□□ -1.71
Trim47Q8C0E3 Gm25006-201ENSMUST00000083813 107 ntBASIC4.38□□□□□ -1.71
Trim47Q8C0E3 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.38□□□□□ -1.71
Trim47Q8C0E3 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim47Q8C0E3 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Trim47Q8C0E3 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.38□□□□□ -1.71
Trim47Q8C0E3 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Gm27271-201ENSMUST00000183509 170 ntBASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Gm43324-201ENSMUST00000197482 289 ntBASIC4.37□□□□□ -1.71
Trim47Q8C0E3 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Gm43898-201ENSMUST00000204456 424 ntBASIC4.37□□□□□ -1.71
Trim47Q8C0E3 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.37□□□□□ -1.71
Trim47Q8C0E3 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Gm23443-201ENSMUST00000082916 128 ntBASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Gm24697-201ENSMUST00000083881 107 ntBASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim47Q8C0E3 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.36□□□□□ -1.71
Trim47Q8C0E3 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim47Q8C0E3 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim47Q8C0E3 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.36□□□□□ -1.71
Trim47Q8C0E3 Gm26273-201ENSMUST00000104180 131 ntBASIC4.36□□□□□ -1.71
Trim47Q8C0E3 Gm15714-201ENSMUST00000117168 250 ntBASIC4.36□□□□□ -1.71
Trim47Q8C0E3 Gm11566-201ENSMUST00000118550 203 ntBASIC4.36□□□□□ -1.71
Trim47Q8C0E3 Gm12897-201ENSMUST00000120341 250 ntBASIC4.36□□□□□ -1.71
Trim47Q8C0E3 Gm17161-201ENSMUST00000169187 524 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms