Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim35Q8C006 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Trim35Q8C006 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim35Q8C006 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim35Q8C006 AC156560.3-201ENSMUST00000222978 3841 ntBASIC5.12□□□□□ -1.59
Trim35Q8C006 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim35Q8C006 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Trim35Q8C006 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim35Q8C006 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Trim35Q8C006 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim35Q8C006 Gm14107-201ENSMUST00000117774 330 ntBASIC5.12□□□□□ -1.59
Trim35Q8C006 Gm25625-201ENSMUST00000157221 96 ntBASIC5.12□□□□□ -1.59
Trim35Q8C006 Gm26318-201ENSMUST00000176507 96 ntBASIC5.12□□□□□ -1.59
Trim35Q8C006 Gm23726-201ENSMUST00000178937 67 ntBASIC5.12□□□□□ -1.59
Trim35Q8C006 Gm37030-201ENSMUST00000194254 295 ntBASIC5.12□□□□□ -1.59
Trim35Q8C006 Gm20368-201ENSMUST00000220716 301 ntBASIC5.12□□□□□ -1.59
Trim35Q8C006 Gm19118-201ENSMUST00000222554 98 ntBASIC5.12□□□□□ -1.59
Trim35Q8C006 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim35Q8C006 Gm24706-201ENSMUST00000082806 137 ntBASIC5.12□□□□□ -1.59
Trim35Q8C006 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim35Q8C006 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim35Q8C006 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim35Q8C006 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim35Q8C006 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim35Q8C006 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.12□□□□□ -1.59
Trim35Q8C006 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim35Q8C006 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim35Q8C006 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim35Q8C006 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim35Q8C006 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim35Q8C006 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Trim35Q8C006 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim35Q8C006 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim35Q8C006 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim35Q8C006 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim35Q8C006 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim35Q8C006 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.11□□□□□ -1.59
Trim35Q8C006 Gm25595-201ENSMUST00000102273 97 ntBASIC5.11□□□□□ -1.59
Trim35Q8C006 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim35Q8C006 Gm14512-201ENSMUST00000117924 230 ntBASIC5.11□□□□□ -1.59
Trim35Q8C006 Gm11281-201ENSMUST00000141391 576 ntBASIC5.11□□□□□ -1.59
Trim35Q8C006 Gm23964-201ENSMUST00000157966 107 ntBASIC5.11□□□□□ -1.59
Trim35Q8C006 Gm23351-201ENSMUST00000158427 125 ntBASIC5.11□□□□□ -1.59
Trim35Q8C006 Mir6903-201ENSMUST00000183597 88 ntBASIC5.11□□□□□ -1.59
Trim35Q8C006 Mir6400-201ENSMUST00000184870 92 ntBASIC5.11□□□□□ -1.59
Trim35Q8C006 Gm42542-201ENSMUST00000197978 268 ntBASIC5.11□□□□□ -1.59
Trim35Q8C006 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim35Q8C006 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.11□□□□□ -1.59
Trim35Q8C006 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim35Q8C006 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim35Q8C006 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Trim35Q8C006 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim35Q8C006 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.11□□□□□ -1.59
Trim35Q8C006 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim35Q8C006 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim35Q8C006 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim35Q8C006 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.1□□□□□ -1.59
Trim35Q8C006 Gm22488-201ENSMUST00000116811 127 ntBASIC5.1□□□□□ -1.59
Trim35Q8C006 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.1□□□□□ -1.59
Trim35Q8C006 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim35Q8C006 Gm25059-201ENSMUST00000157367 117 ntBASIC5.1□□□□□ -1.59
Trim35Q8C006 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim35Q8C006 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC5.1□□□□□ -1.59
Trim35Q8C006 Gm37659-201ENSMUST00000194574 111 ntBASIC5.1□□□□□ -1.59
Trim35Q8C006 Gm42428-201ENSMUST00000198677 302 ntBASIC5.1□□□□□ -1.59
Trim35Q8C006 Gm45422-201ENSMUST00000211476 246 ntBASIC5.1□□□□□ -1.59
Trim35Q8C006 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim35Q8C006 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim35Q8C006 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim35Q8C006 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim35Q8C006 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim35Q8C006 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.09□□□□□ -1.59
Trim35Q8C006 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim35Q8C006 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim35Q8C006 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Trim35Q8C006 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim35Q8C006 Gm24375-201ENSMUST00000104397 132 ntBASIC5.09□□□□□ -1.59
Trim35Q8C006 Gm13155-201ENSMUST00000119277 646 ntBASIC5.09□□□□□ -1.59
Trim35Q8C006 Gm12422-201ENSMUST00000121431 302 ntBASIC5.09□□□□□ -1.59
Trim35Q8C006 Gm8178-201ENSMUST00000121570 646 ntBASIC5.09□□□□□ -1.59
Trim35Q8C006 Gm24378-201ENSMUST00000122699 106 ntBASIC5.09□□□□□ -1.59
Trim35Q8C006 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim35Q8C006 Gm25552-201ENSMUST00000158081 91 ntBASIC5.09□□□□□ -1.59
Trim35Q8C006 Gm25865-201ENSMUST00000158247 104 ntBASIC5.09□□□□□ -1.59
Trim35Q8C006 Gm5900-201ENSMUST00000179862 375 ntBASIC5.09□□□□□ -1.59
Trim35Q8C006 AC153564.2-201ENSMUST00000219464 273 ntBASIC5.09□□□□□ -1.59
Trim35Q8C006 Gm24201-201ENSMUST00000082946 125 ntBASIC5.09□□□□□ -1.59
Trim35Q8C006 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim35Q8C006 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim35Q8C006 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Trim35Q8C006 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Trim35Q8C006 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Trim35Q8C006 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Trim35Q8C006 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim35Q8C006 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.08□□□□□ -1.6
Trim35Q8C006 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim35Q8C006 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
Trim35Q8C006 Gm25496-201ENSMUST00000104430 120 ntBASIC5.08□□□□□ -1.6
Trim35Q8C006 Gm22194-201ENSMUST00000116869 95 ntBASIC5.08□□□□□ -1.6
Trim35Q8C006 Gm16327-201ENSMUST00000137146 228 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms