Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm42623-201ENSMUST00000197225 379 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Gm26226-201ENSMUST00000082509 116 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Mir101a-201ENSMUST00000083517 83 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Gm25411-201ENSMUST00000083760 151 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Gm22088-201ENSMUST00000158341 117 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Gm22776-201ENSMUST00000178634 94 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Gm23767-201ENSMUST00000179278 94 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Gm38274-201ENSMUST00000195689 148 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Gm43402-201ENSMUST00000197159 159 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Gm44654-201ENSMUST00000208052 329 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Gm24208-201ENSMUST00000082783 135 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Gm24948-201ENSMUST00000082866 207 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Gm22443-201ENSMUST00000082890 107 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Snord118-201ENSMUST00000082965 135 ntBASIC0.83□□□□□ -2.28
Col16a1Q8BLX7 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.82□□□□□ -2.28
Col16a1Q8BLX7 Gm22960-201ENSMUST00000122517 104 ntBASIC0.82□□□□□ -2.28
Col16a1Q8BLX7 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Col16a1Q8BLX7 Gm17154-201ENSMUST00000165748 431 ntBASIC0.82□□□□□ -2.28
Col16a1Q8BLX7 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
Col16a1Q8BLX7 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.82□□□□□ -2.28
Col16a1Q8BLX7 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Col16a1Q8BLX7 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Col16a1Q8BLX7 Gm24928-201ENSMUST00000083399 107 ntBASIC0.82□□□□□ -2.28
Col16a1Q8BLX7 Gm25897-201ENSMUST00000083709 107 ntBASIC0.82□□□□□ -2.28
Col16a1Q8BLX7 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.81□□□□□ -2.28
Col16a1Q8BLX7 Gm13343-201ENSMUST00000116474 105 ntBASIC0.81□□□□□ -2.28
Col16a1Q8BLX7 Mir1197-201ENSMUST00000117037 120 ntBASIC0.81□□□□□ -2.28
Col16a1Q8BLX7 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.81□□□□□ -2.28
Col16a1Q8BLX7 Gm14629-201ENSMUST00000122428 144 ntBASIC0.81□□□□□ -2.28
Col16a1Q8BLX7 Adgrg4-206ENSMUST00000168724 531 ntBASIC0.81□□□□□ -2.28
Col16a1Q8BLX7 Gm16399-201ENSMUST00000181423 219 ntBASIC0.81□□□□□ -2.28
Col16a1Q8BLX7 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.81□□□□□ -2.28
Col16a1Q8BLX7 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Col16a1Q8BLX7 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.81□□□□□ -2.28
Col16a1Q8BLX7 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.81□□□□□ -2.28
Col16a1Q8BLX7 Gm26128-201ENSMUST00000083170 110 ntBASIC0.81□□□□□ -2.28
Col16a1Q8BLX7 Mir429-201ENSMUST00000083493 83 ntBASIC0.81□□□□□ -2.28
Col16a1Q8BLX7 Gm24431-201ENSMUST00000104073 66 ntBASIC0.8□□□□□ -2.28
Col16a1Q8BLX7 Gm22074-201ENSMUST00000158595 113 ntBASIC0.8□□□□□ -2.28
Col16a1Q8BLX7 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC0.8□□□□□ -2.28
Col16a1Q8BLX7 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.8□□□□□ -2.28
Col16a1Q8BLX7 Gm43493-201ENSMUST00000199837 202 ntBASIC0.8□□□□□ -2.28
Col16a1Q8BLX7 Gm44564-201ENSMUST00000207985 180 ntBASIC0.8□□□□□ -2.28
Col16a1Q8BLX7 Gm19441-201ENSMUST00000221545 330 ntBASIC0.8□□□□□ -2.28
Col16a1Q8BLX7 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.8□□□□□ -2.28
Col16a1Q8BLX7 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Col16a1Q8BLX7 Gm24582-201ENSMUST00000103967 103 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Gm24476-201ENSMUST00000157437 131 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Mir3473a-201ENSMUST00000175011 78 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Gm24020-201ENSMUST00000180156 108 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Mir6904-201ENSMUST00000183443 67 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Gm37771-201ENSMUST00000193121 265 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Gm22299-201ENSMUST00000082663 136 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Gm14980-201ENSMUST00000121247 736 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Gm3025-201ENSMUST00000163454 489 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Gm3111-201ENSMUST00000167426 490 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Gm28000-201ENSMUST00000184380 85 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Gm18340-201ENSMUST00000196342 609 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Gm23650-201ENSMUST00000083355 70 ntBASIC0.79□□□□□ -2.28
Col16a1Q8BLX7 Gm2348-201ENSMUST00000108782 300 ntBASIC0.78□□□□□ -2.29
Col16a1Q8BLX7 Gm13454-201ENSMUST00000118166 483 ntBASIC0.78□□□□□ -2.29
Col16a1Q8BLX7 Gm14039-201ENSMUST00000118705 101 ntBASIC0.78□□□□□ -2.29
Col16a1Q8BLX7 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.78□□□□□ -2.29
Col16a1Q8BLX7 Gm2966-201ENSMUST00000166052 481 ntBASIC0.78□□□□□ -2.29
Col16a1Q8BLX7 Mir8106-201ENSMUST00000184520 139 ntBASIC0.78□□□□□ -2.29
Col16a1Q8BLX7 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.78□□□□□ -2.29
Col16a1Q8BLX7 Gm43944-201ENSMUST00000205220 120 ntBASIC0.78□□□□□ -2.29
Col16a1Q8BLX7 Gm45366-201ENSMUST00000209828 384 ntBASIC0.78□□□□□ -2.29
Col16a1Q8BLX7 AC172027.1-201ENSMUST00000217659 337 ntBASIC0.78□□□□□ -2.29
Col16a1Q8BLX7 CT009733.1-201ENSMUST00000225322 425 ntBASIC0.78□□□□□ -2.29
Col16a1Q8BLX7 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Gm24793-201ENSMUST00000104289 132 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Gm6272-201ENSMUST00000121256 171 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Gm25423-201ENSMUST00000157609 107 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Gm26213-201ENSMUST00000158582 110 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Mir3057-201ENSMUST00000175040 91 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Mir28b-201ENSMUST00000175399 80 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Gm26236-201ENSMUST00000175536 137 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Mir7077-201ENSMUST00000183991 57 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Gm27517-201ENSMUST00000184347 236 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Gm27588-201ENSMUST00000185096 263 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Gm28838-201ENSMUST00000186338 315 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Gm29635-201ENSMUST00000187221 315 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Gm29026-201ENSMUST00000187787 315 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Gm28797-201ENSMUST00000188543 315 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Gm28855-201ENSMUST00000188680 315 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Gm28705-201ENSMUST00000189548 315 ntBASIC0.77□□□□□ -2.29
Col16a1Q8BLX7 Gm28939-201ENSMUST00000190351 315 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms