Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm14922-201ENSMUST00000121131 163 ntBASIC4.03□□□□□ -1.76
Trim56Q80VI1 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.03□□□□□ -1.76
Trim56Q80VI1 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim56Q80VI1 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim56Q80VI1 Gm25800-201ENSMUST00000082636 134 ntBASIC4.03□□□□□ -1.76
Trim56Q80VI1 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim56Q80VI1 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.77
Trim56Q80VI1 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim56Q80VI1 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim56Q80VI1 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim56Q80VI1 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Trim56Q80VI1 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim56Q80VI1 Gm25538-201ENSMUST00000101943 107 ntBASIC4.02□□□□□ -1.77
Trim56Q80VI1 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim56Q80VI1 Gm13419-201ENSMUST00000121711 271 ntBASIC4.02□□□□□ -1.77
Trim56Q80VI1 Gm23667-201ENSMUST00000157466 120 ntBASIC4.02□□□□□ -1.77
Trim56Q80VI1 Gm22989-201ENSMUST00000158313 86 ntBASIC4.02□□□□□ -1.77
Trim56Q80VI1 Gm24106-201ENSMUST00000175498 127 ntBASIC4.02□□□□□ -1.77
Trim56Q80VI1 Gm27535-201ENSMUST00000183814 157 ntBASIC4.02□□□□□ -1.77
Trim56Q80VI1 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC4.02□□□□□ -1.77
Trim56Q80VI1 Gm44859-201ENSMUST00000207831 94 ntBASIC4.02□□□□□ -1.77
Trim56Q80VI1 Gm44594-201ENSMUST00000208982 407 ntBASIC4.02□□□□□ -1.77
Trim56Q80VI1 Gm45907-201ENSMUST00000213023 193 ntBASIC4.02□□□□□ -1.77
Trim56Q80VI1 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.02□□□□□ -1.77
Trim56Q80VI1 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim56Q80VI1 Gm35405-201ENSMUST00000218754 400 ntBASIC4.02□□□□□ -1.77
Trim56Q80VI1 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim56Q80VI1 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim56Q80VI1 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim56Q80VI1 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Trim56Q80VI1 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim56Q80VI1 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim56Q80VI1 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trim56Q80VI1 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim56Q80VI1 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
Trim56Q80VI1 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
Trim56Q80VI1 Gm22590-201ENSMUST00000104247 128 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Trim56Q80VI1 Gm15714-201ENSMUST00000117168 250 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 Gm13355-201ENSMUST00000117996 317 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 Gm14775-201ENSMUST00000122089 310 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 Gm25543-201ENSMUST00000122678 312 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 Gm23168-201ENSMUST00000157156 143 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 Gm22217-201ENSMUST00000157556 313 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 Gm24739-201ENSMUST00000158855 292 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 Ear-ps8-201ENSMUST00000161935 354 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.01□□□□□ -1.77
Trim56Q80VI1 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC4.01□□□□□ -1.77
Trim56Q80VI1 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Trim56Q80VI1 Gm44343-201ENSMUST00000196702 90 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 AC188459.1-201ENSMUST00000216651 300 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 Gm24533-201ENSMUST00000083138 196 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 Mir193a-201ENSMUST00000083461 66 ntBASIC4.01□□□□□ -1.77
Trim56Q80VI1 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim56Q80VI1 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim56Q80VI1 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim56Q80VI1 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim56Q80VI1 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim56Q80VI1 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4□□□□□ -1.77
Trim56Q80VI1 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim56Q80VI1 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim56Q80VI1 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim56Q80VI1 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4□□□□□ -1.77
Trim56Q80VI1 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trim56Q80VI1 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm13167-201ENSMUST00000118554 578 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm6071-201ENSMUST00000119561 440 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm5396-201ENSMUST00000121222 532 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4□□□□□ -1.77
Trim56Q80VI1 Gm23466-201ENSMUST00000157133 106 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm23326-201ENSMUST00000157419 105 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm22215-201ENSMUST00000157558 96 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm23865-201ENSMUST00000157723 97 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm22537-201ENSMUST00000158172 199 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm25223-201ENSMUST00000158200 110 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm18341-201ENSMUST00000197538 622 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm43680-201ENSMUST00000199466 340 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm44084-201ENSMUST00000203947 409 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 AC108416.2-201ENSMUST00000226792 367 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm22704-201ENSMUST00000083027 137 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Snord14d-201ENSMUST00000083424 86 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim56Q80VI1 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Trim56Q80VI1 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4□□□□□ -1.77
Trim56Q80VI1 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim56Q80VI1 Gm37479-201ENSMUST00000194169 3841 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Gm43715-201ENSMUST00000196307 2715 ntBASIC4□□□□□ -1.77
Trim56Q80VI1 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
Trim56Q80VI1 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4□□□□□ -1.77
Trim56Q80VI1 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.99□□□□□ -1.77
Trim56Q80VI1 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim56Q80VI1 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Trim56Q80VI1 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Trim56Q80VI1 Gm22225-201ENSMUST00000157358 278 ntBASIC3.99□□□□□ -1.77
Trim56Q80VI1 Mir1967-201ENSMUST00000157789 82 ntBASIC3.99□□□□□ -1.77
Trim56Q80VI1 Gm23209-201ENSMUST00000158667 110 ntBASIC3.99□□□□□ -1.77
Trim56Q80VI1 Gm23152-201ENSMUST00000175322 116 ntBASIC3.99□□□□□ -1.77
Trim56Q80VI1 Gm23571-201ENSMUST00000180073 127 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms