Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.55□□□□□ -2
Chd4Q6PDQ2 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.55□□□□□ -2
Chd4Q6PDQ2 Snora69-201ENSMUST00000083708 131 ntBASIC2.55□□□□□ -2
Chd4Q6PDQ2 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.55□□□□□ -2
Chd4Q6PDQ2 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Chd4Q6PDQ2 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.55□□□□□ -2
Chd4Q6PDQ2 Gm14906-201ENSMUST00000119265 390 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm14841-201ENSMUST00000121067 758 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm13210-201ENSMUST00000121483 273 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm15065-201ENSMUST00000121699 273 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm24264-201ENSMUST00000179835 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm7654-201ENSMUST00000186738 683 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Chd4Q6PDQ2 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm25636-201ENSMUST00000082666 133 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.54□□□□□ -2
Chd4Q6PDQ2 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.54□□□□□ -2
Chd4Q6PDQ2 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm26504-201ENSMUST00000102033 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm25938-201ENSMUST00000104139 166 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm22658-201ENSMUST00000104196 155 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm11065-201ENSMUST00000111462 228 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm13331-201ENSMUST00000117500 448 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm22136-201ENSMUST00000158751 268 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.54□□□□□ -2
Chd4Q6PDQ2 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm26502-201ENSMUST00000177732 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm25350-201ENSMUST00000177849 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm23446-201ENSMUST00000177977 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm26201-201ENSMUST00000178047 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm24711-201ENSMUST00000178062 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm24609-201ENSMUST00000178166 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm23265-201ENSMUST00000178321 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm22812-201ENSMUST00000178329 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm26246-201ENSMUST00000178388 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm25155-201ENSMUST00000178450 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm24760-201ENSMUST00000178530 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm22285-201ENSMUST00000178576 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm22417-201ENSMUST00000178656 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm26270-201ENSMUST00000178690 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm23313-201ENSMUST00000178931 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm23089-201ENSMUST00000178947 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm24153-201ENSMUST00000179280 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm25597-201ENSMUST00000179388 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm25816-201ENSMUST00000179764 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm26188-201ENSMUST00000179963 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm26433-201ENSMUST00000180227 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm22128-201ENSMUST00000180346 94 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.54□□□□□ -2
Chd4Q6PDQ2 Gm5001-201ENSMUST00000204361 331 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 AC159619.2-201ENSMUST00000222924 401 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Rny3-201ENSMUST00000083011 102 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Mir137-201ENSMUST00000083635 73 ntBASIC2.54□□□□□ -2
Chd4Q6PDQ2 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Chd4Q6PDQ2 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Chd4Q6PDQ2 Gm26396-201ENSMUST00000104093 132 ntBASIC2.53□□□□□ -2
Chd4Q6PDQ2 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.53□□□□□ -2
Chd4Q6PDQ2 Gm12721-201ENSMUST00000120621 268 ntBASIC2.53□□□□□ -2
Chd4Q6PDQ2 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.53□□□□□ -2
Chd4Q6PDQ2 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.53□□□□□ -2
Chd4Q6PDQ2 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.53□□□□□ -2
Chd4Q6PDQ2 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.53□□□□□ -2
Chd4Q6PDQ2 Mir6402-201ENSMUST00000183406 80 ntBASIC2.53□□□□□ -2
Chd4Q6PDQ2 Mir7678-201ENSMUST00000185076 71 ntBASIC2.53□□□□□ -2
Chd4Q6PDQ2 Mir3569-201ENSMUST00000185080 58 ntBASIC2.53□□□□□ -2
Chd4Q6PDQ2 Gm38109-201ENSMUST00000195386 181 ntBASIC2.53□□□□□ -2
Chd4Q6PDQ2 Gm23370-202ENSMUST00000197008 129 ntBASIC2.53□□□□□ -2
Chd4Q6PDQ2 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.53□□□□□ -2
Chd4Q6PDQ2 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.53□□□□□ -2
Chd4Q6PDQ2 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.53□□□□□ -2
Chd4Q6PDQ2 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.53□□□□□ -2
Chd4Q6PDQ2 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.53□□□□□ -2
Chd4Q6PDQ2 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.53□□□□□ -2.01
Chd4Q6PDQ2 Gm12765-201ENSMUST00000117273 615 ntBASIC2.52□□□□□ -2.01
Chd4Q6PDQ2 Gm11356-201ENSMUST00000118974 192 ntBASIC2.52□□□□□ -2.01
Chd4Q6PDQ2 Gm23196-201ENSMUST00000158806 107 ntBASIC2.52□□□□□ -2.01
Chd4Q6PDQ2 Gm25836-201ENSMUST00000158918 123 ntBASIC2.52□□□□□ -2.01
Chd4Q6PDQ2 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Chd4Q6PDQ2 Gm28825-201ENSMUST00000186233 238 ntBASIC2.52□□□□□ -2.01
Chd4Q6PDQ2 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms