Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Smarcc2Q6PDG5 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Mir693-201ENSMUST00000102187 89 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm6574-201ENSMUST00000120037 362 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm26477-201ENSMUST00000122617 323 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm22561-201ENSMUST00000157331 84 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm24720-201ENSMUST00000157518 166 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm26414-201ENSMUST00000157674 269 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Mir3106-201ENSMUST00000175401 82 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm21893-201ENSMUST00000179119 397 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm7909-201ENSMUST00000182688 614 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm37763-201ENSMUST00000193445 120 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm37290-201ENSMUST00000195775 339 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm9795-201ENSMUST00000062156 693 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.67□□□□□ -1.82
Smarcc2Q6PDG5 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Gm24890-201ENSMUST00000104389 102 ntBASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Gm22984-201ENSMUST00000122751 122 ntBASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Gm23956-201ENSMUST00000157211 119 ntBASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Gm26287-201ENSMUST00000158887 81 ntBASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Gm22308-201ENSMUST00000177609 107 ntBASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Gm32222-201ENSMUST00000203296 298 ntBASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Gm19790-201ENSMUST00000214414 251 ntBASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Gm23297-201ENSMUST00000083184 127 ntBASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Smarcc2Q6PDG5 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Smarcc2Q6PDG5 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Smarcc2Q6PDG5 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Smarcc2Q6PDG5 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Smarcc2Q6PDG5 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Smarcc2Q6PDG5 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 Gm24172-201ENSMUST00000104127 117 ntBASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 Gm24376-201ENSMUST00000104399 127 ntBASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 Gm13343-201ENSMUST00000116474 105 ntBASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 Gm15162-201ENSMUST00000119325 283 ntBASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 Gm15190-201ENSMUST00000120855 276 ntBASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 Gm23887-201ENSMUST00000122683 172 ntBASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 Gm17100-201ENSMUST00000168963 272 ntBASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.65□□□□□ -1.83
Smarcc2Q6PDG5 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Gm24119-201ENSMUST00000103979 246 ntBASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Gm16218-201ENSMUST00000155424 388 ntBASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Gm25220-201ENSMUST00000157546 95 ntBASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Gm24138-201ENSMUST00000157572 114 ntBASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Gm25664-201ENSMUST00000157697 107 ntBASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Gm24730-201ENSMUST00000158228 117 ntBASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Gm24885-201ENSMUST00000158783 270 ntBASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Nron-204ENSMUST00000158971 370 ntBASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Gm27893-201ENSMUST00000184408 194 ntBASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Gm29104-201ENSMUST00000186304 222 ntBASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Gm44533-201ENSMUST00000207782 268 ntBASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Gm44594-201ENSMUST00000208982 407 ntBASIC3.64□□□□□ -1.83
Smarcc2Q6PDG5 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms