Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Mir6540-201ENSMUST00000184886 108 ntBASIC3.41□□□□□ -1.86
Shkbp1Q6P7W2 Gm29574-201ENSMUST00000186226 696 ntBASIC3.41□□□□□ -1.86
Shkbp1Q6P7W2 Gm28828-201ENSMUST00000186601 696 ntBASIC3.41□□□□□ -1.86
Shkbp1Q6P7W2 Gm28159-201ENSMUST00000190296 696 ntBASIC3.41□□□□□ -1.86
Shkbp1Q6P7W2 Gm44393-201ENSMUST00000197418 138 ntBASIC3.41□□□□□ -1.86
Shkbp1Q6P7W2 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.41□□□□□ -1.86
Shkbp1Q6P7W2 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.41□□□□□ -1.86
Shkbp1Q6P7W2 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.41□□□□□ -1.86
Shkbp1Q6P7W2 Gm26454-201ENSMUST00000082682 107 ntBASIC3.41□□□□□ -1.86
Shkbp1Q6P7W2 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.41□□□□□ -1.86
Shkbp1Q6P7W2 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.41□□□□□ -1.86
Shkbp1Q6P7W2 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Shkbp1Q6P7W2 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.4□□□□□ -1.86
Shkbp1Q6P7W2 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Shkbp1Q6P7W2 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Shkbp1Q6P7W2 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.4□□□□□ -1.86
Shkbp1Q6P7W2 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.4□□□□□ -1.86
Shkbp1Q6P7W2 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Shkbp1Q6P7W2 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Gm13343-201ENSMUST00000116474 105 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Mir1198-201ENSMUST00000116995 121 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Gm13443-201ENSMUST00000120770 555 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Gm14551-201ENSMUST00000120802 256 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Gm23887-201ENSMUST00000122683 172 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Nron-204ENSMUST00000158971 370 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Gm24106-201ENSMUST00000175498 127 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Gm22450-201ENSMUST00000179641 107 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Gm25024-201ENSMUST00000179667 104 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Gm25473-201ENSMUST00000180191 107 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Mir376a-201ENSMUST00000197584 68 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Gm6842-201ENSMUST00000211361 390 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 AC154636.2-201ENSMUST00000222538 161 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Gm26071-201ENSMUST00000083261 107 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Gm24521-201ENSMUST00000083958 107 ntBASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Shkbp1Q6P7W2 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm26423-201ENSMUST00000104277 128 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm26018-201ENSMUST00000104406 128 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm12617-201ENSMUST00000121268 381 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm24720-201ENSMUST00000157518 166 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm23640-201ENSMUST00000157860 104 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm22315-201ENSMUST00000158010 143 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm25920-201ENSMUST00000158307 99 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm25015-201ENSMUST00000158400 128 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm29022-201ENSMUST00000190702 225 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm37624-201ENSMUST00000193751 219 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm44349-201ENSMUST00000197048 123 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm44030-201ENSMUST00000204865 432 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm23615-201ENSMUST00000082602 65 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm10242-201ENSMUST00000090064 330 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.39□□□□□ -1.87
Shkbp1Q6P7W2 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Snord19-201ENSMUST00000104609 76 ntBASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Gm22322-201ENSMUST00000157151 111 ntBASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Gm25220-201ENSMUST00000157546 95 ntBASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Gm25223-201ENSMUST00000158200 110 ntBASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Gm17522-201ENSMUST00000178144 498 ntBASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Gm27851-201ENSMUST00000183529 63 ntBASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Gm7422-201ENSMUST00000220115 640 ntBASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Gm23454-201ENSMUST00000083332 133 ntBASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Shkbp1Q6P7W2 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm25407-201ENSMUST00000104102 134 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm11065-201ENSMUST00000111462 228 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm14894-201ENSMUST00000117170 270 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm13210-201ENSMUST00000121483 273 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm15065-201ENSMUST00000121699 273 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms