Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm24803-201ENSMUST00000083693 107 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Gm23103-201ENSMUST00000083725 107 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Gm22580-201ENSMUST00000083727 107 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Gm24260-201ENSMUST00000083741 107 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Gm23732-201ENSMUST00000083751 107 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Gm22682-201ENSMUST00000083854 107 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Gm25869-201ENSMUST00000083855 107 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Gm24693-201ENSMUST00000083885 107 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Gm26317-201ENSMUST00000083894 107 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Gm24448-201ENSMUST00000083979 107 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Gm22798-201ENSMUST00000083992 107 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Gm26427-201ENSMUST00000093648 107 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Gm22886-201ENSMUST00000093714 107 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Gm22170-201ENSMUST00000097247 107 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.76□□□□□ -1.81
Trim28Q62318 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim28Q62318 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim28Q62318 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim28Q62318 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim28Q62318 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.75□□□□□ -1.81
Trim28Q62318 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
Trim28Q62318 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trim28Q62318 Gm12071-201ENSMUST00000121968 469 ntBASIC3.75□□□□□ -1.81
Trim28Q62318 Gm13424-201ENSMUST00000122301 354 ntBASIC3.75□□□□□ -1.81
Trim28Q62318 Gm24879-201ENSMUST00000158386 143 ntBASIC3.75□□□□□ -1.81
Trim28Q62318 Gm26214-201ENSMUST00000158581 107 ntBASIC3.75□□□□□ -1.81
Trim28Q62318 Gm27540-201ENSMUST00000184950 187 ntBASIC3.75□□□□□ -1.81
Trim28Q62318 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.75□□□□□ -1.81
Trim28Q62318 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.75□□□□□ -1.81
Trim28Q62318 Gm45273-201ENSMUST00000211559 281 ntBASIC3.75□□□□□ -1.81
Trim28Q62318 Gm46993-201ENSMUST00000220708 259 ntBASIC3.75□□□□□ -1.81
Trim28Q62318 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trim28Q62318 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim28Q62318 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trim28Q62318 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trim28Q62318 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.75□□□□□ -1.81
Trim28Q62318 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.74□□□□□ -1.81
Trim28Q62318 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.74□□□□□ -1.81
Trim28Q62318 Gm24122-201ENSMUST00000104107 132 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Gm5937-201ENSMUST00000119715 643 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim28Q62318 Gm14694-201ENSMUST00000121856 282 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Gm24443-201ENSMUST00000157242 132 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Nron-204ENSMUST00000158971 370 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Gm27535-201ENSMUST00000183814 157 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Gm28623-201ENSMUST00000187219 192 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Mir7661-201ENSMUST00000197023 61 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Gm44399-201ENSMUST00000205043 226 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim28Q62318 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim28Q62318 AC164561.1-201ENSMUST00000220414 115 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim28Q62318 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.74□□□□□ -1.81
Trim28Q62318 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
Trim28Q62318 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Trim28Q62318 Gm25783-201ENSMUST00000122525 190 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.73□□□□□ -1.81
Trim28Q62318 Gm24691-201ENSMUST00000157762 140 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 Gm22961-201ENSMUST00000157964 106 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 Gm17183-201ENSMUST00000171170 493 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 Gm25071-201ENSMUST00000175232 70 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 Gm34314-201ENSMUST00000203622 367 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 Gm44977-201ENSMUST00000205283 420 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 Gm18213-201ENSMUST00000207850 178 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 Gm46233-201ENSMUST00000217831 449 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 Gm22970-201ENSMUST00000083304 186 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 Gm25755-201ENSMUST00000083396 107 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 Gm23741-201ENSMUST00000097237 171 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.73□□□□□ -1.81
Trim28Q62318 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Trim28Q62318 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trim28Q62318 Gm14448-201ENSMUST00000116383 210 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Gm15223-201ENSMUST00000120989 826 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Gm24630-201ENSMUST00000122768 106 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Gm25664-201ENSMUST00000157697 107 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Gm22766-201ENSMUST00000158372 99 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Gm2962-201ENSMUST00000159266 336 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim28Q62318 Gm24085-201ENSMUST00000175172 116 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Gm24862-201ENSMUST00000179103 79 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Gm23310-201ENSMUST00000179105 79 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Gm25461-201ENSMUST00000179293 79 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Mir7242-201ENSMUST00000183710 79 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Gm28288-201ENSMUST00000191019 214 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms