Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm24165-201ENSMUST00000082718 128 ntBASIC1.62□□□□□ -2.15
Six4Q61321 Gm24412-201ENSMUST00000083426 109 ntBASIC1.62□□□□□ -2.15
Six4Q61321 Gm25518-201ENSMUST00000083864 107 ntBASIC1.62□□□□□ -2.15
Six4Q61321 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
Six4Q61321 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
Six4Q61321 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
Six4Q61321 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.61□□□□□ -2.15
Six4Q61321 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Six4Q61321 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Six4Q61321 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.61□□□□□ -2.15
Six4Q61321 Gm22750-201ENSMUST00000102076 103 ntBASIC1.61□□□□□ -2.15
Six4Q61321 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Six4Q61321 Gm15714-201ENSMUST00000117168 250 ntBASIC1.61□□□□□ -2.15
Six4Q61321 Gm14013-201ENSMUST00000119006 270 ntBASIC1.61□□□□□ -2.15
Six4Q61321 Gm13804-201ENSMUST00000119552 172 ntBASIC1.61□□□□□ -2.15
Six4Q61321 Gm15115-201ENSMUST00000121145 264 ntBASIC1.61□□□□□ -2.15
Six4Q61321 Gm15878-201ENSMUST00000127561 306 ntBASIC1.61□□□□□ -2.15
Six4Q61321 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.61□□□□□ -2.15
Six4Q61321 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
Six4Q61321 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Six4Q61321 Gm29231-201ENSMUST00000179850 319 ntBASIC1.61□□□□□ -2.15
Six4Q61321 Gm24518-201ENSMUST00000180275 94 ntBASIC1.61□□□□□ -2.15
Six4Q61321 Gm23862-201ENSMUST00000180342 94 ntBASIC1.61□□□□□ -2.15
Six4Q61321 Gm9022-202ENSMUST00000183285 483 ntBASIC1.61□□□□□ -2.15
Six4Q61321 Gm27588-201ENSMUST00000185096 263 ntBASIC1.61□□□□□ -2.15
Six4Q61321 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Six4Q61321 Gm44923-201ENSMUST00000206673 85 ntBASIC1.61□□□□□ -2.15
Six4Q61321 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.61□□□□□ -2.15
Six4Q61321 Gm18774-201ENSMUST00000218269 601 ntBASIC1.61□□□□□ -2.15
Six4Q61321 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.61□□□□□ -2.15
Six4Q61321 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.61□□□□□ -2.15
Six4Q61321 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.61□□□□□ -2.15
Six4Q61321 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.61□□□□□ -2.15
Six4Q61321 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Six4Q61321 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Six4Q61321 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Six4Q61321 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Six4Q61321 Gm15526-201ENSMUST00000112504 204 ntBASIC1.6□□□□□ -2.15
Six4Q61321 Gm14887-201ENSMUST00000119522 663 ntBASIC1.6□□□□□ -2.15
Six4Q61321 Gm14215-201ENSMUST00000120578 221 ntBASIC1.6□□□□□ -2.15
Six4Q61321 Gm14638-201ENSMUST00000121338 216 ntBASIC1.6□□□□□ -2.15
Six4Q61321 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.6□□□□□ -2.15
Six4Q61321 Gm23230-201ENSMUST00000157298 133 ntBASIC1.6□□□□□ -2.15
Six4Q61321 Gm24222-201ENSMUST00000158834 93 ntBASIC1.6□□□□□ -2.15
Six4Q61321 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.6□□□□□ -2.15
Six4Q61321 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Six4Q61321 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Six4Q61321 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Six4Q61321 Gm9892-201ENSMUST00000182415 992 ntBASIC1.6□□□□□ -2.15
Six4Q61321 Gm27248-201ENSMUST00000184004 166 ntBASIC1.6□□□□□ -2.15
Six4Q61321 Mir496b-201ENSMUST00000184935 113 ntBASIC1.6□□□□□ -2.15
Six4Q61321 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
Six4Q61321 Gm37054-201ENSMUST00000193481 543 ntBASIC1.6□□□□□ -2.15
Six4Q61321 Gm44282-201ENSMUST00000203199 190 ntBASIC1.6□□□□□ -2.15
Six4Q61321 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.6□□□□□ -2.15
Six4Q61321 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.6□□□□□ -2.15
Six4Q61321 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.6□□□□□ -2.15
Six4Q61321 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.6□□□□□ -2.15
Six4Q61321 Gm26263-201ENSMUST00000083281 164 ntBASIC1.6□□□□□ -2.15
Six4Q61321 Mir320-201ENSMUST00000083594 82 ntBASIC1.6□□□□□ -2.15
Six4Q61321 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.6□□□□□ -2.15
Six4Q61321 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Six4Q61321 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Six4Q61321 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Six4Q61321 Gm22831-201ENSMUST00000102473 109 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Gm14823-201ENSMUST00000117698 238 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Gm13588-201ENSMUST00000120026 135 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Gm11389-201ENSMUST00000121407 430 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Gm14530-201ENSMUST00000122391 333 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.59□□□□□ -2.15
Six4Q61321 Gm22316-201ENSMUST00000158012 216 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Gm22389-201ENSMUST00000158193 301 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Gm22668-201ENSMUST00000158716 260 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Gm23196-201ENSMUST00000158806 107 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Gm23144-201ENSMUST00000180226 107 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Mir6351-201ENSMUST00000183826 99 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Mir7118-201ENSMUST00000197760 61 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.59□□□□□ -2.15
Six4Q61321 Gm17906-201ENSMUST00000202480 901 ntBASIC1.59□□□□□ -2.15
Six4Q61321 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.59□□□□□ -2.15
Six4Q61321 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.59□□□□□ -2.15
Six4Q61321 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.59□□□□□ -2.15
Six4Q61321 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
Six4Q61321 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Six4Q61321 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.59□□□□□ -2.15
Six4Q61321 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Six4Q61321 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Six4Q61321 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.58□□□□□ -2.16
Six4Q61321 Gm13714-201ENSMUST00000117313 221 ntBASIC1.58□□□□□ -2.16
Six4Q61321 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.58□□□□□ -2.16
Six4Q61321 Gm14362-201ENSMUST00000121679 273 ntBASIC1.58□□□□□ -2.16
Six4Q61321 Gm14366-201ENSMUST00000121970 730 ntBASIC1.58□□□□□ -2.16
Six4Q61321 Gm25325-201ENSMUST00000122559 86 ntBASIC1.58□□□□□ -2.16
Six4Q61321 Gm15254-201ENSMUST00000149567 273 ntBASIC1.58□□□□□ -2.16
Six4Q61321 Gm22386-201ENSMUST00000158192 129 ntBASIC1.58□□□□□ -2.16
Six4Q61321 Gm27878-201ENSMUST00000184000 106 ntBASIC1.58□□□□□ -2.16
Six4Q61321 Mir7225-201ENSMUST00000184178 54 ntBASIC1.58□□□□□ -2.16
Six4Q61321 Mir3068-202ENSMUST00000197755 79 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 126.3 ms