Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm24430-201ENSMUST00000104077 104 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Gm14551-201ENSMUST00000120802 256 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Gm22143-201ENSMUST00000157401 203 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Gm23586-201ENSMUST00000157657 123 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Gm25958-201ENSMUST00000175114 71 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Gm22800-201ENSMUST00000175627 94 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Gm42509-201ENSMUST00000197390 781 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Gm44564-201ENSMUST00000207985 180 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 AC134335.1-201ENSMUST00000227626 329 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Gm22997-201ENSMUST00000082845 107 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Gm24805-201ENSMUST00000082931 104 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Gm26175-201ENSMUST00000083794 131 ntBASIC1.56□□□□□ -2.16
Upf3bQ3ULL6 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Gm12636-201ENSMUST00000117395 624 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Gm14674-201ENSMUST00000117816 342 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Gm23184-201ENSMUST00000122594 131 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Gm25706-201ENSMUST00000157828 247 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Gm23181-201ENSMUST00000158685 110 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Gm16162-201ENSMUST00000162296 297 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Gm20543-201ENSMUST00000174200 726 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Mir6399-201ENSMUST00000184050 84 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Gm37361-201ENSMUST00000194345 132 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Gm43529-201ENSMUST00000199178 412 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Gm22062-201ENSMUST00000082563 107 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Gm24707-201ENSMUST00000082812 107 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Gm24045-201ENSMUST00000083113 98 ntBASIC1.55□□□□□ -2.16
Upf3bQ3ULL6 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 Gm25421-201ENSMUST00000104218 164 ntBASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 Gm12351-201ENSMUST00000118727 292 ntBASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 Gm24895-201ENSMUST00000122742 74 ntBASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 Gm25831-201ENSMUST00000158924 163 ntBASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 Mir6341-201ENSMUST00000183490 121 ntBASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 Gm44384-201ENSMUST00000200208 114 ntBASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 Gm43004-201ENSMUST00000201872 703 ntBASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 Gm25636-201ENSMUST00000082666 133 ntBASIC1.54□□□□□ -2.16
Upf3bQ3ULL6 Gm25832-201ENSMUST00000104140 130 ntBASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Gm15659-201ENSMUST00000118881 341 ntBASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Gm15162-201ENSMUST00000119325 283 ntBASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Gm5396-201ENSMUST00000121222 532 ntBASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Mir3086-201ENSMUST00000175072 87 ntBASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Gm23289-201ENSMUST00000175615 108 ntBASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Gm23619-201ENSMUST00000178411 94 ntBASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Gm25933-201ENSMUST00000178943 108 ntBASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Gm25474-201ENSMUST00000179052 94 ntBASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Gm22047-201ENSMUST00000179176 94 ntBASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Gm27493-201ENSMUST00000184128 78 ntBASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Gm43680-201ENSMUST00000199466 340 ntBASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Gm24921-201ENSMUST00000083024 107 ntBASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.53□□□□□ -2.16
Upf3bQ3ULL6 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm12370-201ENSMUST00000117809 604 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm14678-201ENSMUST00000121396 482 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm14402-201ENSMUST00000122217 508 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm25784-201ENSMUST00000122524 81 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm23122-201ENSMUST00000157645 103 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm23641-201ENSMUST00000157857 101 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm22963-201ENSMUST00000157960 91 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm23221-201ENSMUST00000158118 93 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm24902-201ENSMUST00000158126 123 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm22668-201ENSMUST00000158716 260 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm24388-201ENSMUST00000177872 107 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm25670-201ENSMUST00000178423 107 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm26239-201ENSMUST00000178842 107 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm24267-201ENSMUST00000179841 107 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm44666-201ENSMUST00000208544 391 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 Gm17990-201ENSMUST00000211728 553 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 AC159476.2-201ENSMUST00000216221 418 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.52□□□□□ -2.17
Upf3bQ3ULL6 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 127.7 ms