Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Nkx6-3Q3UHX8 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm12837-201ENSMUST00000120131 373 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm12155-201ENSMUST00000121267 160 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Mup-ps22-201ENSMUST00000121611 243 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm15986-201ENSMUST00000122153 400 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm22389-201ENSMUST00000158193 301 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm27410-201ENSMUST00000183851 115 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm28838-201ENSMUST00000186338 315 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm20058-201ENSMUST00000186939 284 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm29635-201ENSMUST00000187221 315 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm29026-201ENSMUST00000187787 315 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm28797-201ENSMUST00000188543 315 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm20257-202ENSMUST00000188643 130 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm28855-201ENSMUST00000188680 315 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm28705-201ENSMUST00000189548 315 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm28939-201ENSMUST00000190351 315 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm28223-201ENSMUST00000190469 315 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm29092-201ENSMUST00000190768 315 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm32033-201ENSMUST00000193483 339 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm43739-201ENSMUST00000198294 307 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm42739-201ENSMUST00000200687 226 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm43901-201ENSMUST00000203247 453 ntBASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Nkx6-3Q3UHX8 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Gm12934-201ENSMUST00000119221 343 ntBASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Gm24908-201ENSMUST00000157294 127 ntBASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Gm22843-201ENSMUST00000157710 134 ntBASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Gm22654-201ENSMUST00000157874 105 ntBASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Gm24056-201ENSMUST00000158617 146 ntBASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Snord53-201ENSMUST00000175146 78 ntBASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Mir7667-201ENSMUST00000183866 63 ntBASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Gm43510-201ENSMUST00000197922 353 ntBASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Gm23247-201ENSMUST00000083373 107 ntBASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Nkx6-3Q3UHX8 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Mir466k-201ENSMUST00000116774 122 ntBASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Gm12876-201ENSMUST00000120975 408 ntBASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Gm22479-201ENSMUST00000122566 81 ntBASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Gm16362-201ENSMUST00000135189 214 ntBASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Gm16358-201ENSMUST00000146046 210 ntBASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Gm23409-201ENSMUST00000158516 237 ntBASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Gm8338-201ENSMUST00000163928 363 ntBASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Gm26400-201ENSMUST00000175012 85 ntBASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Mir6346-201ENSMUST00000183982 81 ntBASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Gm37807-201ENSMUST00000194310 190 ntBASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Gm44063-201ENSMUST00000203307 376 ntBASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Gm23264-201ENSMUST00000083372 107 ntBASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.53□□□□□ -2
Nkx6-3Q3UHX8 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.53□□□□□ -2.01
Nkx6-3Q3UHX8 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
Nkx6-3Q3UHX8 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
Nkx6-3Q3UHX8 Gm24122-201ENSMUST00000104107 132 ntBASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Gm24338-201ENSMUST00000104205 127 ntBASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Gm26247-201ENSMUST00000116702 91 ntBASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Gm25270-201ENSMUST00000122606 138 ntBASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Gm23779-201ENSMUST00000157938 64 ntBASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Gm43406-201ENSMUST00000200356 334 ntBASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Gm45288-201ENSMUST00000210236 151 ntBASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 AC163295.1-201ENSMUST00000227840 314 ntBASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Mir181a-2-201ENSMUST00000083489 76 ntBASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Mir496a-201ENSMUST00000093627 79 ntBASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Nkx6-3Q3UHX8 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 128.6 ms