Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm25666-201ENSMUST00000157702 107 ntBASIC4.34□□□□□ -1.71
Col17a1Q07563 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC4.34□□□□□ -1.71
Col17a1Q07563 Gm25956-201ENSMUST00000175115 217 ntBASIC4.34□□□□□ -1.71
Col17a1Q07563 Gm22114-201ENSMUST00000177756 107 ntBASIC4.34□□□□□ -1.71
Col17a1Q07563 Gm37128-201ENSMUST00000192599 232 ntBASIC4.34□□□□□ -1.71
Col17a1Q07563 CT954323.1-201ENSMUST00000222774 229 ntBASIC4.34□□□□□ -1.71
Col17a1Q07563 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col17a1Q07563 Gm24705-201ENSMUST00000082808 107 ntBASIC4.34□□□□□ -1.71
Col17a1Q07563 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.34□□□□□ -1.71
Col17a1Q07563 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Col17a1Q07563 Gm37642-201ENSMUST00000193166 1735 ntBASIC4.34□□□□□ -1.71
Col17a1Q07563 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Col17a1Q07563 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col17a1Q07563 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col17a1Q07563 Gm15162-201ENSMUST00000119325 283 ntBASIC4.33□□□□□ -1.72
Col17a1Q07563 Gm6574-201ENSMUST00000120037 362 ntBASIC4.33□□□□□ -1.72
Col17a1Q07563 Gm14915-201ENSMUST00000120747 204 ntBASIC4.33□□□□□ -1.72
Col17a1Q07563 Gm22961-201ENSMUST00000157964 106 ntBASIC4.33□□□□□ -1.72
Col17a1Q07563 AC154297.1-201ENSMUST00000171334 397 ntBASIC4.33□□□□□ -1.72
Col17a1Q07563 Gm22108-201ENSMUST00000177961 106 ntBASIC4.33□□□□□ -1.72
Col17a1Q07563 Gm24798-201ENSMUST00000179334 106 ntBASIC4.33□□□□□ -1.72
Col17a1Q07563 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col17a1Q07563 Gm29140-201ENSMUST00000190187 476 ntBASIC4.33□□□□□ -1.72
Col17a1Q07563 Gm29884-201ENSMUST00000218403 453 ntBASIC4.33□□□□□ -1.72
Col17a1Q07563 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.33□□□□□ -1.72
Col17a1Q07563 Gm26439-201ENSMUST00000082592 106 ntBASIC4.33□□□□□ -1.72
Col17a1Q07563 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col17a1Q07563 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col17a1Q07563 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col17a1Q07563 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Col17a1Q07563 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col17a1Q07563 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC4.32□□□□□ -1.72
Col17a1Q07563 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col17a1Q07563 Gm24715-201ENSMUST00000102377 95 ntBASIC4.32□□□□□ -1.72
Col17a1Q07563 Gm14940-201ENSMUST00000119309 495 ntBASIC4.32□□□□□ -1.72
Col17a1Q07563 Gm23167-201ENSMUST00000157155 103 ntBASIC4.32□□□□□ -1.72
Col17a1Q07563 Gm22814-201ENSMUST00000157452 104 ntBASIC4.32□□□□□ -1.72
Col17a1Q07563 Gm24409-201ENSMUST00000157881 152 ntBASIC4.32□□□□□ -1.72
Col17a1Q07563 Gm8114-201ENSMUST00000172225 484 ntBASIC4.32□□□□□ -1.72
Col17a1Q07563 Gm29350-201ENSMUST00000189141 541 ntBASIC4.32□□□□□ -1.72
Col17a1Q07563 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC4.32□□□□□ -1.72
Col17a1Q07563 Gm45296-201ENSMUST00000209625 205 ntBASIC4.32□□□□□ -1.72
Col17a1Q07563 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.32□□□□□ -1.72
Col17a1Q07563 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.32□□□□□ -1.72
Col17a1Q07563 Gm33654-201ENSMUST00000221704 215 ntBASIC4.32□□□□□ -1.72
Col17a1Q07563 Gm25987-201ENSMUST00000083234 107 ntBASIC4.32□□□□□ -1.72
Col17a1Q07563 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col17a1Q07563 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col17a1Q07563 Gm10813-201ENSMUST00000099936 90 ntBASIC4.32□□□□□ -1.72
Col17a1Q07563 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col17a1Q07563 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col17a1Q07563 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.32□□□□□ -1.72
Col17a1Q07563 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col17a1Q07563 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm45130-201ENSMUST00000207574 3388 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm25538-201ENSMUST00000101943 107 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Mir758-201ENSMUST00000103260 81 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col17a1Q07563 Snord98-201ENSMUST00000116819 65 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm14119-201ENSMUST00000119511 235 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm5937-201ENSMUST00000119715 643 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm13729-201ENSMUST00000120328 406 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm12956-201ENSMUST00000122184 414 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm14298-201ENSMUST00000139032 237 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm16356-201ENSMUST00000143300 169 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm26001-201ENSMUST00000157989 103 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm25654-201ENSMUST00000158467 88 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm22891-201ENSMUST00000158641 164 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm24100-201ENSMUST00000178592 79 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm24137-201ENSMUST00000180055 79 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm22391-201ENSMUST00000180356 79 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm27410-201ENSMUST00000183851 115 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm27285-201ENSMUST00000183875 127 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm38044-201ENSMUST00000192964 487 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col17a1Q07563 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm25801-201ENSMUST00000082638 106 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm22297-201ENSMUST00000083312 106 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm43879-201ENSMUST00000203811 3760 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm43663-201ENSMUST00000198643 1505 ntBASIC4.31□□□□□ -1.72
Col17a1Q07563 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col17a1Q07563 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col17a1Q07563 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col17a1Q07563 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col17a1Q07563 Gm22831-201ENSMUST00000102473 109 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 Gm12647-201ENSMUST00000118977 265 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 Gm22145-201ENSMUST00000157396 148 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 Gm23325-201ENSMUST00000157422 129 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 Gm23120-201ENSMUST00000157654 287 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 Gm16326-201ENSMUST00000162843 414 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col17a1Q07563 Gm37624-201ENSMUST00000193751 219 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col17a1Q07563 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col17a1Q07563 AC130222.1-201ENSMUST00000221198 256 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 Gm23848-201ENSMUST00000083826 106 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 227.1 ms