Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col6a1Q04857 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col6a1Q04857 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col6a1Q04857 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Col6a1Q04857 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a1Q04857 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col6a1Q04857 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col6a1Q04857 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm25539-201ENSMUST00000116886 122 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm24244-201ENSMUST00000157317 130 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm23584-201ENSMUST00000157655 129 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm23642-201ENSMUST00000157858 258 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm22384-201ENSMUST00000158187 104 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm20399-201ENSMUST00000174652 132 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm27903-201ENSMUST00000175482 126 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.03□□□□□ -1.76
Col6a1Q04857 Snord80-202ENSMUST00000199023 77 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm45778-201ENSMUST00000211959 153 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a1Q04857 AC100209.2-201ENSMUST00000224461 451 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm22245-201ENSMUST00000082479 103 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm25813-201ENSMUST00000082748 191 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm24950-201ENSMUST00000082768 191 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm22297-201ENSMUST00000083312 106 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm23971-201ENSMUST00000083317 191 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm23849-201ENSMUST00000083833 191 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm26316-201ENSMUST00000083886 191 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Gm25630-201ENSMUST00000084000 162 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.03□□□□□ -1.76
Col6a1Q04857 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col6a1Q04857 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col6a1Q04857 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a1Q04857 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.02□□□□□ -1.77
Col6a1Q04857 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a1Q04857 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a1Q04857 Gm24282-201ENSMUST00000104232 66 ntBASIC4.02□□□□□ -1.77
Col6a1Q04857 Gm8244-201ENSMUST00000121254 264 ntBASIC4.02□□□□□ -1.77
Col6a1Q04857 n-R5s216-201ENSMUST00000122755 112 ntBASIC4.02□□□□□ -1.77
Col6a1Q04857 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.02□□□□□ -1.77
Col6a1Q04857 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.02□□□□□ -1.77
Col6a1Q04857 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC4.02□□□□□ -1.77
Col6a1Q04857 Gm5967-201ENSMUST00000172723 494 ntBASIC4.02□□□□□ -1.77
Col6a1Q04857 Mir6383-201ENSMUST00000184545 116 ntBASIC4.02□□□□□ -1.77
Col6a1Q04857 Gm28155-201ENSMUST00000191066 151 ntBASIC4.02□□□□□ -1.77
Col6a1Q04857 Gm44337-201ENSMUST00000196553 114 ntBASIC4.02□□□□□ -1.77
Col6a1Q04857 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.02□□□□□ -1.77
Col6a1Q04857 Gm40810-201ENSMUST00000219149 253 ntBASIC4.02□□□□□ -1.77
Col6a1Q04857 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.02□□□□□ -1.77
Col6a1Q04857 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.02□□□□□ -1.77
Col6a1Q04857 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col6a1Q04857 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Col6a1Q04857 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col6a1Q04857 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a1Q04857 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a1Q04857 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col6a1Q04857 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Col6a1Q04857 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col6a1Q04857 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a1Q04857 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm24118-201ENSMUST00000103972 126 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm9157-201ENSMUST00000117673 225 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm14782-201ENSMUST00000120151 195 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm27592-201ENSMUST00000157729 126 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm23641-201ENSMUST00000157857 101 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm22174-201ENSMUST00000175050 125 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm22692-201ENSMUST00000175055 125 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm27634-201ENSMUST00000175060 126 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm26460-201ENSMUST00000175061 126 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm22460-201ENSMUST00000175269 124 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm24365-201ENSMUST00000175384 125 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm44310-201ENSMUST00000175424 126 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm22639-201ENSMUST00000175591 125 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm25198-201ENSMUST00000178574 110 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm24979-201ENSMUST00000178626 126 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm27743-201ENSMUST00000185136 126 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC4.01□□□□□ -1.77
Col6a1Q04857 Mir7682-201ENSMUST00000198467 58 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm42526-201ENSMUST00000198956 393 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm44520-201ENSMUST00000205447 802 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm22247-201ENSMUST00000082476 131 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm24204-201ENSMUST00000082950 107 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm43404-201ENSMUST00000200424 2534 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm42801-201ENSMUST00000202562 2865 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Col6a1Q04857 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Col6a1Q04857 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Col6a1Q04857 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.01□□□□□ -1.77
Col6a1Q04857 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a1Q04857 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col6a1Q04857 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col6a1Q04857 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a1Q04857 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a1Q04857 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms