Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm25369-201ENSMUST00000158848 132 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm5967-201ENSMUST00000172723 494 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm29603-201ENSMUST00000186792 334 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm6003-201ENSMUST00000187903 463 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col8a1Q00780 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC3.2□□□□□ -1.9
Col8a1Q00780 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm24762-201ENSMUST00000083689 104 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm10360-201ENSMUST00000097219 272 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col8a1Q00780 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Col8a1Q00780 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Col8a1Q00780 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Col8a1Q00780 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col8a1Q00780 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.19□□□□□ -1.9
Col8a1Q00780 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col8a1Q00780 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col8a1Q00780 Gm26387-201ENSMUST00000104238 132 ntBASIC3.19□□□□□ -1.9
Col8a1Q00780 Gm23530-201ENSMUST00000104564 137 ntBASIC3.19□□□□□ -1.9
Col8a1Q00780 Gm14073-201ENSMUST00000117344 381 ntBASIC3.19□□□□□ -1.9
Col8a1Q00780 Gm25805-201ENSMUST00000122788 108 ntBASIC3.19□□□□□ -1.9
Col8a1Q00780 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.19□□□□□ -1.9
Col8a1Q00780 Gm22349-201ENSMUST00000157864 107 ntBASIC3.19□□□□□ -1.9
Col8a1Q00780 Gm25519-201ENSMUST00000158392 127 ntBASIC3.19□□□□□ -1.9
Col8a1Q00780 Gm27477-201ENSMUST00000184649 143 ntBASIC3.19□□□□□ -1.9
Col8a1Q00780 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.19□□□□□ -1.9
Col8a1Q00780 Gm37361-201ENSMUST00000194345 132 ntBASIC3.19□□□□□ -1.9
Col8a1Q00780 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.19□□□□□ -1.9
Col8a1Q00780 Gm24966-201ENSMUST00000082443 79 ntBASIC3.19□□□□□ -1.9
Col8a1Q00780 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col8a1Q00780 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col8a1Q00780 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.19□□□□□ -1.9
Col8a1Q00780 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col8a1Q00780 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.19□□□□□ -1.9
Col8a1Q00780 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col8a1Q00780 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col8a1Q00780 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col8a1Q00780 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
Col8a1Q00780 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col8a1Q00780 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.18□□□□□ -1.9
Col8a1Q00780 Gm26027-201ENSMUST00000122725 268 ntBASIC3.18□□□□□ -1.9
Col8a1Q00780 Gm16354-201ENSMUST00000155376 150 ntBASIC3.18□□□□□ -1.9
Col8a1Q00780 Gm26200-201ENSMUST00000180273 79 ntBASIC3.18□□□□□ -1.9
Col8a1Q00780 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.18□□□□□ -1.9
Col8a1Q00780 Gm28848-201ENSMUST00000189984 168 ntBASIC3.18□□□□□ -1.9
Col8a1Q00780 Mir7118-201ENSMUST00000197760 61 ntBASIC3.18□□□□□ -1.9
Col8a1Q00780 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.18□□□□□ -1.9
Col8a1Q00780 Gm44030-201ENSMUST00000204865 432 ntBASIC3.18□□□□□ -1.9
Col8a1Q00780 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.18□□□□□ -1.9
Col8a1Q00780 Gm24356-201ENSMUST00000082859 106 ntBASIC3.18□□□□□ -1.9
Col8a1Q00780 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col8a1Q00780 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.18□□□□□ -1.9
Col8a1Q00780 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col8a1Q00780 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col8a1Q00780 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col8a1Q00780 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col8a1Q00780 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
Col8a1Q00780 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col8a1Q00780 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
Col8a1Q00780 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
Col8a1Q00780 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col8a1Q00780 Mir872-201ENSMUST00000104728 81 ntBASIC3.17□□□□□ -1.9
Col8a1Q00780 Mdga2-203ENSMUST00000113942 423 ntBASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm13478-201ENSMUST00000118312 413 ntBASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm25860-201ENSMUST00000158252 126 ntBASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm25606-201ENSMUST00000158363 95 ntBASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm23198-201ENSMUST00000158811 91 ntBASIC3.17□□□□□ -1.9
Col8a1Q00780 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm27903-201ENSMUST00000175482 126 ntBASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm28755-201ENSMUST00000185773 199 ntBASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm7182-201ENSMUST00000193351 732 ntBASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm44337-201ENSMUST00000196553 114 ntBASIC3.17□□□□□ -1.9
Col8a1Q00780 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.17□□□□□ -1.9
Col8a1Q00780 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Col8a1Q00780 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col8a1Q00780 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Col8a1Q00780 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Col8a1Q00780 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Col8a1Q00780 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col8a1Q00780 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col8a1Q00780 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col8a1Q00780 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col8a1Q00780 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm22003-201ENSMUST00000101885 107 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm13432-201ENSMUST00000118861 241 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm14069-201ENSMUST00000120815 229 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm11281-201ENSMUST00000141391 576 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 558.1 ms