Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm13602-201ENSMUST00000122405 493 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm23429-201ENSMUST00000122486 149 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm25706-201ENSMUST00000157828 247 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm23025-201ENSMUST00000158769 111 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm24174-201ENSMUST00000158933 111 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm25243-201ENSMUST00000174912 207 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm29550-201ENSMUST00000185543 285 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm37727-201ENSMUST00000191637 819 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm42647-201ENSMUST00000195939 459 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm35212-201ENSMUST00000196672 606 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm18991-201ENSMUST00000209225 746 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Nkx3-1P97436 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm24268-201ENSMUST00000082990 110 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Gm24490-201ENSMUST00000083803 98 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Olfr575-201ENSMUST00000084812 957 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Snora33-201ENSMUST00000093556 129 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.3□□□□□ -2.2
Nkx3-1P97436 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Nkx3-1P97436 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Nkx3-1P97436 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.29□□□□□ -2.2
Nkx3-1P97436 Gm14049-201ENSMUST00000121009 636 ntBASIC1.29□□□□□ -2.2
Nkx3-1P97436 Gm14366-201ENSMUST00000121970 730 ntBASIC1.29□□□□□ -2.2
Nkx3-1P97436 Gm15878-201ENSMUST00000127561 306 ntBASIC1.29□□□□□ -2.2
Nkx3-1P97436 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Nkx3-1P97436 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.29□□□□□ -2.2
Nkx3-1P97436 Gm22382-201ENSMUST00000158185 130 ntBASIC1.29□□□□□ -2.2
Nkx3-1P97436 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Nkx3-1P97436 Gm9251-201ENSMUST00000197202 628 ntBASIC1.29□□□□□ -2.2
Nkx3-1P97436 Gm42925-201ENSMUST00000197359 285 ntBASIC1.29□□□□□ -2.2
Nkx3-1P97436 Gm42672-201ENSMUST00000197821 352 ntBASIC1.29□□□□□ -2.2
Nkx3-1P97436 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.29□□□□□ -2.2
Nkx3-1P97436 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.29□□□□□ -2.2
Nkx3-1P97436 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.29□□□□□ -2.2
Nkx3-1P97436 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.29□□□□□ -2.2
Nkx3-1P97436 Gm23448-201ENSMUST00000083151 104 ntBASIC1.29□□□□□ -2.2
Nkx3-1P97436 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.29□□□□□ -2.2
Nkx3-1P97436 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC1.29□□□□□ -2.2
Nkx3-1P97436 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Nkx3-1P97436 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
Nkx3-1P97436 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.28□□□□□ -2.2
Nkx3-1P97436 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Nkx3-1P97436 Gm13378-201ENSMUST00000117483 336 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Gm13331-201ENSMUST00000117500 448 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Gm14774-201ENSMUST00000117857 536 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Gm14887-201ENSMUST00000119522 663 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.28□□□□□ -2.2
Nkx3-1P97436 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.28□□□□□ -2.2
Nkx3-1P97436 Gm26049-201ENSMUST00000157313 108 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Nkx3-1P97436 Gm24306-201ENSMUST00000180229 79 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Gm29603-201ENSMUST00000186792 334 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.28□□□□□ -2.2
Nkx3-1P97436 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Nkx3-1P97436 Gm33354-201ENSMUST00000195448 906 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Gm9236-201ENSMUST00000196892 587 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Mir6962-201ENSMUST00000199512 63 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.28□□□□□ -2.2
Nkx3-1P97436 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Gm22572-201ENSMUST00000082985 105 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Gm26263-201ENSMUST00000083281 164 ntBASIC1.28□□□□□ -2.2
Nkx3-1P97436 Mdga2-203ENSMUST00000113942 423 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm15714-201ENSMUST00000117168 250 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm23332-201ENSMUST00000157424 275 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm22535-201ENSMUST00000158174 119 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm22389-201ENSMUST00000158193 301 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm22076-201ENSMUST00000158601 84 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm20689-201ENSMUST00000176033 279 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm27722-201ENSMUST00000183908 76 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm27493-201ENSMUST00000184128 78 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm29429-201ENSMUST00000187071 121 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm29640-201ENSMUST00000187972 278 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm37709-201ENSMUST00000195074 600 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm31230-201ENSMUST00000199725 785 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm17906-201ENSMUST00000202480 901 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm45658-201ENSMUST00000209197 580 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm19140-201ENSMUST00000209790 421 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm23517-201ENSMUST00000082830 192 ntBASIC1.27□□□□□ -2.21
Nkx3-1P97436 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Nkx3-1P97436 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Nkx3-1P97436 Gm26082-201ENSMUST00000104070 127 ntBASIC1.26□□□□□ -2.21
Nkx3-1P97436 Gm12102-201ENSMUST00000118251 604 ntBASIC1.26□□□□□ -2.21
Nkx3-1P97436 Gm11786-201ENSMUST00000120799 155 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms