Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm25269-201ENSMUST00000122601 104 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.89□□□□□ -1.79
Sox1P53783 Gm22883-201ENSMUST00000157376 106 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm24015-201ENSMUST00000157725 232 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm27592-201ENSMUST00000157729 126 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm22316-201ENSMUST00000158012 216 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm23380-201ENSMUST00000158448 103 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Sox1P53783 Gm22174-201ENSMUST00000175050 125 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm22692-201ENSMUST00000175055 125 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm27634-201ENSMUST00000175060 126 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm26460-201ENSMUST00000175061 126 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm22460-201ENSMUST00000175269 124 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm24365-201ENSMUST00000175384 125 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm44310-201ENSMUST00000175424 126 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm22639-201ENSMUST00000175591 125 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm24979-201ENSMUST00000178626 126 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm27645-201ENSMUST00000183348 77 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm27445-201ENSMUST00000184484 72 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm27743-201ENSMUST00000185136 126 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.89□□□□□ -1.79
Sox1P53783 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.89□□□□□ -1.79
Sox1P53783 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Sox1P53783 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Sox1P53783 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Sox1P53783 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Sox1P53783 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Sox1P53783 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Sox1P53783 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Sox1P53783 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Sox1P53783 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Sox1P53783 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Sox1P53783 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Sox1P53783 Gm24482-201ENSMUST00000117005 93 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Gm25985-201ENSMUST00000122677 107 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Gm26020-201ENSMUST00000122729 183 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Gm24681-201ENSMUST00000158760 107 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Gm23198-201ENSMUST00000158811 91 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Sox1P53783 Gm20399-201ENSMUST00000174652 132 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Gm27903-201ENSMUST00000175482 126 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Gm23370-202ENSMUST00000197008 129 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Gm43680-201ENSMUST00000199466 340 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Sox1P53783 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Gm18991-201ENSMUST00000209225 746 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Gm18015-201ENSMUST00000214879 316 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Gm46138-201ENSMUST00000215294 426 ntBASIC3.88□□□□□ -1.79
Sox1P53783 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Sox1P53783 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Sox1P53783 Gm37461-201ENSMUST00000193929 3704 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Sox1P53783 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.88□□□□□ -1.79
Sox1P53783 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Sox1P53783 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Sox1P53783 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sox1P53783 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.87□□□□□ -1.79
Sox1P53783 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Sox1P53783 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
Sox1P53783 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Sox1P53783 Gm12934-201ENSMUST00000119221 343 ntBASIC3.87□□□□□ -1.79
Sox1P53783 Gm22606-201ENSMUST00000158290 103 ntBASIC3.87□□□□□ -1.79
Sox1P53783 Gm22664-201ENSMUST00000158719 105 ntBASIC3.87□□□□□ -1.79
Sox1P53783 Gm23239-201ENSMUST00000083006 181 ntBASIC3.87□□□□□ -1.79
Sox1P53783 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sox1P53783 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.87□□□□□ -1.79
Sox1P53783 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Sox1P53783 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.87□□□□□ -1.79
Sox1P53783 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
Sox1P53783 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.87□□□□□ -1.79
Sox1P53783 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.87□□□□□ -1.79
Sox1P53783 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sox1P53783 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Sox1P53783 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Sox1P53783 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Sox1P53783 Gm22674-201ENSMUST00000104413 131 ntBASIC3.86□□□□□ -1.79
Sox1P53783 Gm22957-201ENSMUST00000122511 123 ntBASIC3.86□□□□□ -1.79
Sox1P53783 Gm22378-201ENSMUST00000157481 111 ntBASIC3.86□□□□□ -1.79
Sox1P53783 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC3.86□□□□□ -1.79
Sox1P53783 Gm29097-201ENSMUST00000190273 422 ntBASIC3.86□□□□□ -1.79
Sox1P53783 Gm44470-201ENSMUST00000203913 142 ntBASIC3.86□□□□□ -1.79
Sox1P53783 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.86□□□□□ -1.79
Sox1P53783 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.86□□□□□ -1.79
Sox1P53783 Mir215-201ENSMUST00000083628 112 ntBASIC3.86□□□□□ -1.79
Sox1P53783 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.86□□□□□ -1.79
Sox1P53783 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Sox1P53783 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sox1P53783 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sox1P53783 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sox1P53783 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.86□□□□□ -1.79
Sox1P53783 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Sox1P53783 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.86□□□□□ -1.79
Sox1P53783 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sox1P53783 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sox1P53783 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.85□□□□□ -1.79
Sox1P53783 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sox1P53783 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Sox1P53783 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms