Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Nkx2-1P50220 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Nkx2-1P50220 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
Nkx2-1P50220 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm11556-201ENSMUST00000120751 288 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm25945-201ENSMUST00000122484 135 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.26□□□□□ -2.05
Nkx2-1P50220 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm23000-201ENSMUST00000157083 139 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm23586-201ENSMUST00000157657 123 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm23196-201ENSMUST00000158806 107 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm25162-201ENSMUST00000158906 159 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm18520-201ENSMUST00000174783 658 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm22348-201ENSMUST00000178674 79 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm26622-201ENSMUST00000180520 298 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Nkx2-1P50220 Mir6386-201ENSMUST00000183558 104 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.26□□□□□ -2.05
Nkx2-1P50220 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm43286-201ENSMUST00000197420 424 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm44083-201ENSMUST00000203114 337 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm9377-201ENSMUST00000207227 623 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm44594-201ENSMUST00000208982 407 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm45508-201ENSMUST00000209298 299 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Nkx2-1P50220 Gm10298-201ENSMUST00000074801 265 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Snord42a-201ENSMUST00000082606 65 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Mir323-201ENSMUST00000083683 86 ntBASIC2.26□□□□□ -2.05
Nkx2-1P50220 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Nkx2-1P50220 Mir673-201ENSMUST00000102361 91 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm23836-201ENSMUST00000104434 129 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Mir875-201ENSMUST00000104698 78 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm23653-201ENSMUST00000116751 97 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm14823-201ENSMUST00000117698 238 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm11794-201ENSMUST00000119446 237 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm15272-201ENSMUST00000120865 233 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm12872-201ENSMUST00000121835 320 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm14389-201ENSMUST00000140453 241 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm24443-201ENSMUST00000157242 132 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm24846-201ENSMUST00000158033 108 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm22389-201ENSMUST00000158193 301 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm26406-201ENSMUST00000158503 124 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm26005-201ENSMUST00000158802 134 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm7925-201ENSMUST00000166690 401 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm23191-201ENSMUST00000179147 107 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Mir6370-201ENSMUST00000183510 120 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm5329-201ENSMUST00000186898 463 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm37746-201ENSMUST00000193249 198 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm44063-201ENSMUST00000203307 376 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm44825-201ENSMUST00000207557 150 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm44598-201ENSMUST00000207566 150 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm44811-201ENSMUST00000209120 228 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm18346-201ENSMUST00000216782 325 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm9318-201ENSMUST00000222444 438 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Snord14d-201ENSMUST00000083424 86 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Nkx2-1P50220 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.25□□□□□ -2.05
Nkx2-1P50220 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Nkx2-1P50220 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Nkx2-1P50220 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm25466-201ENSMUST00000103995 132 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm25308-201ENSMUST00000104171 158 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm23988-201ENSMUST00000117034 122 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm12779-201ENSMUST00000121496 143 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm26278-201ENSMUST00000157098 132 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm23168-201ENSMUST00000157156 143 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm24787-201ENSMUST00000157380 123 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm4468-201ENSMUST00000170206 294 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm24082-201ENSMUST00000175175 83 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm27786-201ENSMUST00000184337 70 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm29352-201ENSMUST00000188054 544 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm9402-201ENSMUST00000196849 388 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.24□□□□□ -2.05
Nkx2-1P50220 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm24457-201ENSMUST00000083196 105 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm23451-201ENSMUST00000083328 122 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Gm22577-201ENSMUST00000083731 109 ntBASIC2.24□□□□□ -2.05
Nkx2-1P50220 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.24□□□□□ -2.05
Nkx2-1P50220 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Nkx2-1P50220 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.23□□□□□ -2.05
Nkx2-1P50220 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Nkx2-1P50220 Gm22115-201ENSMUST00000103976 133 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms