Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm2066-201ENSMUST00000118046 389 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Gm14736-201ENSMUST00000121470 336 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Gm13901-201ENSMUST00000137252 468 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Gm25341-201ENSMUST00000157461 268 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Gm25909-201ENSMUST00000157619 121 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Gm24853-201ENSMUST00000158026 121 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Gm25831-201ENSMUST00000158924 163 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Gm24174-201ENSMUST00000158933 111 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Col2a1P28481 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Col2a1P28481 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Col2a1P28481 Gm7909-201ENSMUST00000182688 614 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Gm27385-201ENSMUST00000184747 104 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Gm19147-201ENSMUST00000199622 652 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Gm44353-201ENSMUST00000200618 138 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Gm44961-201ENSMUST00000207450 196 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Gm45387-201ENSMUST00000209792 632 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Gm45673-201ENSMUST00000210293 358 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.91□□□□□ -2.1
Col2a1P28481 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Gm23347-201ENSMUST00000083823 82 ntBASIC1.91□□□□□ -2.1
Col2a1P28481 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Col2a1P28481 AA413626-201ENSMUST00000121125 494 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Gm11384-201ENSMUST00000121376 303 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Gm12872-201ENSMUST00000121835 320 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC1.9□□□□□ -2.11
Col2a1P28481 Gm24783-201ENSMUST00000157639 100 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Gm22136-201ENSMUST00000158751 268 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.9□□□□□ -2.11
Col2a1P28481 Gm20534-201ENSMUST00000172957 172 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Gm24810-201ENSMUST00000175317 70 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Gm21744-201ENSMUST00000178403 662 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.9□□□□□ -2.11
Col2a1P28481 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Gm37029-201ENSMUST00000195773 239 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Gm15235-201ENSMUST00000200572 194 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.9□□□□□ -2.11
Col2a1P28481 Gm46193-201ENSMUST00000219399 364 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.9□□□□□ -2.11
Col2a1P28481 Gm20102-201ENSMUST00000222445 220 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.9□□□□□ -2.11
Col2a1P28481 Gm24043-201ENSMUST00000083108 116 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Mir320-201ENSMUST00000083594 82 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.9□□□□□ -2.11
Col2a1P28481 AC153526.2-201ENSMUST00000218206 2031 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Col2a1P28481 Gm26147-201ENSMUST00000104479 114 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm14574-201ENSMUST00000120644 279 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm21737-201ENSMUST00000178112 664 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm21815-201ENSMUST00000178213 664 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm20874-201ENSMUST00000178356 663 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm20901-201ENSMUST00000180177 664 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm23523-201ENSMUST00000180190 107 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm27490-201ENSMUST00000184754 128 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Mir7665-201ENSMUST00000184907 63 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm21647-201ENSMUST00000189755 664 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.89□□□□□ -2.11
Col2a1P28481 Gm44324-201ENSMUST00000198517 135 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm43991-201ENSMUST00000203751 274 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.89□□□□□ -2.11
Col2a1P28481 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.89□□□□□ -2.11
Col2a1P28481 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm23627-201ENSMUST00000082459 107 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm22502-201ENSMUST00000082488 107 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm22977-201ENSMUST00000082615 107 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm24149-201ENSMUST00000082757 107 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm24045-201ENSMUST00000083113 98 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm25579-201ENSMUST00000083407 106 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Olfr575-201ENSMUST00000084812 957 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Col2a1P28481 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Col2a1P28481 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Col2a1P28481 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.89□□□□□ -2.11
Col2a1P28481 Gm22834-201ENSMUST00000102021 79 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 Gm13510-201ENSMUST00000118659 429 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 Gm22098-201ENSMUST00000157930 85 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 Gm22766-201ENSMUST00000158372 99 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col2a1P28481 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col2a1P28481 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col2a1P28481 Gm9022-202ENSMUST00000183285 483 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 Gm29350-201ENSMUST00000189141 541 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 Gm28744-201ENSMUST00000189939 340 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 Gm7858-201ENSMUST00000190177 622 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 Gm33354-201ENSMUST00000195448 906 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 Gm43723-201ENSMUST00000196886 189 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 Gm44726-201ENSMUST00000203427 217 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.88□□□□□ -2.11
Col2a1P28481 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.88□□□□□ -2.11
Col2a1P28481 Gm23404-201ENSMUST00000082543 97 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms