Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm37300-201ENSMUST00000193327 280 ntBASIC3.85□□□□□ -1.79
Hoxd9P28357 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Hoxd9P28357 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.85□□□□□ -1.79
Hoxd9P28357 Gm46998-201ENSMUST00000221444 330 ntBASIC3.85□□□□□ -1.79
Hoxd9P28357 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.85□□□□□ -1.79
Hoxd9P28357 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hoxd9P28357 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Hoxd9P28357 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hoxd9P28357 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Hoxd9P28357 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Hoxd9P28357 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.85□□□□□ -1.79
Hoxd9P28357 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Hoxd9P28357 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Hoxd9P28357 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.84□□□□□ -1.79
Hoxd9P28357 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.84□□□□□ -1.79
Hoxd9P28357 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hoxd9P28357 Mir767-201ENSMUST00000103256 107 ntBASIC3.84□□□□□ -1.79
Hoxd9P28357 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Hoxd9P28357 Gm13478-201ENSMUST00000118312 413 ntBASIC3.84□□□□□ -1.79
Hoxd9P28357 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.84□□□□□ -1.79
Hoxd9P28357 Gm22490-201ENSMUST00000157188 119 ntBASIC3.84□□□□□ -1.79
Hoxd9P28357 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Hoxd9P28357 Gm44349-201ENSMUST00000197048 123 ntBASIC3.84□□□□□ -1.79
Hoxd9P28357 Gm43853-201ENSMUST00000197162 301 ntBASIC3.84□□□□□ -1.79
Hoxd9P28357 Gm43206-201ENSMUST00000197990 114 ntBASIC3.84□□□□□ -1.79
Hoxd9P28357 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.84□□□□□ -1.79
Hoxd9P28357 Gm43898-201ENSMUST00000204456 424 ntBASIC3.84□□□□□ -1.79
Hoxd9P28357 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.84□□□□□ -1.79
Hoxd9P28357 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.84□□□□□ -1.79
Hoxd9P28357 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hoxd9P28357 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hoxd9P28357 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
Hoxd9P28357 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.84□□□□□ -1.8
Hoxd9P28357 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hoxd9P28357 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Hoxd9P28357 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm12427-201ENSMUST00000117719 302 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm12897-201ENSMUST00000120341 250 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm23713-201ENSMUST00000157353 70 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm22615-201ENSMUST00000158102 70 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm24503-201ENSMUST00000158454 135 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm17161-201ENSMUST00000169187 524 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm34139-201ENSMUST00000196166 294 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hoxd9P28357 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 AC164086.1-201ENSMUST00000221038 289 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm5548-201ENSMUST00000055878 397 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm26165-201ENSMUST00000083791 138 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm25006-201ENSMUST00000083813 107 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.83□□□□□ -1.8
Hoxd9P28357 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hoxd9P28357 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hoxd9P28357 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hoxd9P28357 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hoxd9P28357 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
Hoxd9P28357 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.82□□□□□ -1.8
Hoxd9P28357 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Hoxd9P28357 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
Hoxd9P28357 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.82□□□□□ -1.8
Hoxd9P28357 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Hoxd9P28357 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Hoxd9P28357 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Hoxd9P28357 Gm24894-201ENSMUST00000122744 118 ntBASIC3.82□□□□□ -1.8
Hoxd9P28357 Gm24634-201ENSMUST00000158672 107 ntBASIC3.82□□□□□ -1.8
Hoxd9P28357 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Hoxd9P28357 Gm26219-201ENSMUST00000175216 71 ntBASIC3.82□□□□□ -1.8
Hoxd9P28357 AC124104.1-201ENSMUST00000226279 417 ntBASIC3.82□□□□□ -1.8
Hoxd9P28357 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.82□□□□□ -1.8
Hoxd9P28357 Gm25142-201ENSMUST00000082698 107 ntBASIC3.82□□□□□ -1.8
Hoxd9P28357 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.82□□□□□ -1.8
Hoxd9P28357 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Hoxd9P28357 Gm10730-201ENSMUST00000194097 2723 ntBASIC3.82□□□□□ -1.8
Hoxd9P28357 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.82□□□□□ -1.8
Hoxd9P28357 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Hoxd9P28357 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Hoxd9P28357 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.81□□□□□ -1.8
Hoxd9P28357 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Hoxd9P28357 Gm9157-201ENSMUST00000117673 225 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 Gm14402-201ENSMUST00000122217 508 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 Gm24930-201ENSMUST00000158315 83 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 Gm22708-201ENSMUST00000158987 103 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 Gm27271-201ENSMUST00000183509 170 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 Gm28409-201ENSMUST00000187064 103 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 Gm28267-201ENSMUST00000191093 265 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 Gm43324-201ENSMUST00000197482 289 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 Gm9377-201ENSMUST00000207227 623 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Hoxd9P28357 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Hoxd9P28357 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms