Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm22792-201ENSMUST00000157225 133 ntBASIC3.99□□□□□ -1.77
RaraP11416 Gm24716-201ENSMUST00000157524 104 ntBASIC3.99□□□□□ -1.77
RaraP11416 Gm17067-202ENSMUST00000180131 123 ntBASIC3.99□□□□□ -1.77
RaraP11416 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.99□□□□□ -1.77
RaraP11416 Gm44650-201ENSMUST00000206929 194 ntBASIC3.99□□□□□ -1.77
RaraP11416 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.99□□□□□ -1.77
RaraP11416 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.99□□□□□ -1.77
RaraP11416 Gm10351-201ENSMUST00000087694 125 ntBASIC3.99□□□□□ -1.77
RaraP11416 Gm24163-201ENSMUST00000093660 132 ntBASIC3.99□□□□□ -1.77
RaraP11416 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RaraP11416 Gm14914-201ENSMUST00000117576 2031 ntBASIC3.99□□□□□ -1.77
RaraP11416 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RaraP11416 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RaraP11416 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.98□□□□□ -1.77
RaraP11416 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RaraP11416 Gm26293-201ENSMUST00000104170 84 ntBASIC3.98□□□□□ -1.77
RaraP11416 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.98□□□□□ -1.77
RaraP11416 Gm12443-201ENSMUST00000122308 323 ntBASIC3.98□□□□□ -1.77
RaraP11416 Gm22225-201ENSMUST00000157358 278 ntBASIC3.98□□□□□ -1.77
RaraP11416 Gm23391-201ENSMUST00000157579 104 ntBASIC3.98□□□□□ -1.77
RaraP11416 Gm22011-201ENSMUST00000158790 123 ntBASIC3.98□□□□□ -1.77
RaraP11416 Mir1966-201ENSMUST00000158807 108 ntBASIC3.98□□□□□ -1.77
RaraP11416 Gm23860-201ENSMUST00000179446 132 ntBASIC3.98□□□□□ -1.77
RaraP11416 Gm29167-201ENSMUST00000190024 377 ntBASIC3.98□□□□□ -1.77
RaraP11416 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RaraP11416 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
RaraP11416 Gm44182-201ENSMUST00000204052 115 ntBASIC3.98□□□□□ -1.77
RaraP11416 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.98□□□□□ -1.77
RaraP11416 AC124739.2-201ENSMUST00000222201 109 ntBASIC3.98□□□□□ -1.77
RaraP11416 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.98□□□□□ -1.77
RaraP11416 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.98□□□□□ -1.77
RaraP11416 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RaraP11416 Gm25592-201ENSMUST00000082635 131 ntBASIC3.98□□□□□ -1.77
RaraP11416 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RaraP11416 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RaraP11416 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RaraP11416 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RaraP11416 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RaraP11416 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RaraP11416 Gm22758-201ENSMUST00000102275 96 ntBASIC3.97□□□□□ -1.77
RaraP11416 Gm25938-201ENSMUST00000104139 166 ntBASIC3.97□□□□□ -1.77
RaraP11416 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RaraP11416 Snord92-201ENSMUST00000175548 85 ntBASIC3.97□□□□□ -1.77
RaraP11416 Mir713-201ENSMUST00000178651 108 ntBASIC3.97□□□□□ -1.77
RaraP11416 Mir6905-201ENSMUST00000184228 70 ntBASIC3.97□□□□□ -1.77
RaraP11416 Gm28650-201ENSMUST00000188413 411 ntBASIC3.97□□□□□ -1.77
RaraP11416 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.97□□□□□ -1.77
RaraP11416 Gm35405-201ENSMUST00000218754 400 ntBASIC3.97□□□□□ -1.77
RaraP11416 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RaraP11416 Snora19-201ENSMUST00000082962 132 ntBASIC3.97□□□□□ -1.77
RaraP11416 Gm23658-201ENSMUST00000083233 132 ntBASIC3.97□□□□□ -1.77
RaraP11416 Gm25895-201ENSMUST00000083714 100 ntBASIC3.97□□□□□ -1.77
RaraP11416 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RaraP11416 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.97□□□□□ -1.77
RaraP11416 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RaraP11416 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RaraP11416 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RaraP11416 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RaraP11416 Mir466b-3-201ENSMUST00000103806 81 ntBASIC3.96□□□□□ -1.78
RaraP11416 Gm22269-201ENSMUST00000104002 130 ntBASIC3.96□□□□□ -1.78
RaraP11416 Gm25168-201ENSMUST00000104189 132 ntBASIC3.96□□□□□ -1.78
RaraP11416 Gm24792-201ENSMUST00000104286 128 ntBASIC3.96□□□□□ -1.78
RaraP11416 Gm14020-201ENSMUST00000118165 662 ntBASIC3.96□□□□□ -1.78
RaraP11416 Gm6071-201ENSMUST00000119561 440 ntBASIC3.96□□□□□ -1.78
RaraP11416 Gm23044-201ENSMUST00000157891 100 ntBASIC3.96□□□□□ -1.78
RaraP11416 Gm27718-201ENSMUST00000183721 86 ntBASIC3.96□□□□□ -1.78
RaraP11416 Mir21b-201ENSMUST00000184317 108 ntBASIC3.96□□□□□ -1.78
RaraP11416 Gm28825-201ENSMUST00000186233 238 ntBASIC3.96□□□□□ -1.78
RaraP11416 Gm38356-201ENSMUST00000194313 408 ntBASIC3.96□□□□□ -1.78
RaraP11416 Ighv15-1-201ENSMUST00000194450 276 ntBASIC3.96□□□□□ -1.78
RaraP11416 Gm45687-201ENSMUST00000209454 155 ntBASIC3.96□□□□□ -1.78
RaraP11416 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.96□□□□□ -1.78
RaraP11416 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RaraP11416 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RaraP11416 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.95□□□□□ -1.78
RaraP11416 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.95□□□□□ -1.78
RaraP11416 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RaraP11416 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RaraP11416 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
RaraP11416 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
RaraP11416 Gm25420-201ENSMUST00000104216 127 ntBASIC3.95□□□□□ -1.78
RaraP11416 Gm11874-201ENSMUST00000117437 130 ntBASIC3.95□□□□□ -1.78
RaraP11416 Gm14564-201ENSMUST00000122159 294 ntBASIC3.95□□□□□ -1.78
RaraP11416 Gm22036-201ENSMUST00000157279 215 ntBASIC3.95□□□□□ -1.78
RaraP11416 Gm24053-201ENSMUST00000158620 105 ntBASIC3.95□□□□□ -1.78
RaraP11416 Gm20399-201ENSMUST00000174652 132 ntBASIC3.95□□□□□ -1.78
RaraP11416 Gm17966-201ENSMUST00000193453 594 ntBASIC3.95□□□□□ -1.78
RaraP11416 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RaraP11416 Gm44429-201ENSMUST00000203542 186 ntBASIC3.95□□□□□ -1.78
RaraP11416 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC3.95□□□□□ -1.78
RaraP11416 Gm10298-201ENSMUST00000074801 265 ntBASIC3.95□□□□□ -1.78
RaraP11416 Gm24616-201ENSMUST00000083274 139 ntBASIC3.95□□□□□ -1.78
RaraP11416 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RaraP11416 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RaraP11416 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RaraP11416 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RaraP11416 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RaraP11416 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
RaraP11416 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RaraP11416 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms