Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.8□□□□□ -2.28
Col1a1P11087 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC0.8□□□□□ -2.28
Col1a1P11087 Gm26327-201ENSMUST00000093724 111 ntBASIC0.8□□□□□ -2.28
Col1a1P11087 Mir1197-201ENSMUST00000117037 120 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Gm14785-201ENSMUST00000120185 539 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Snrpert-201ENSMUST00000121967 279 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Gm12591-201ENSMUST00000122407 1177 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Gm6956-201ENSMUST00000134724 546 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC0.79□□□□□ -2.28
Col1a1P11087 Gm24476-201ENSMUST00000157437 131 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Gm24777-201ENSMUST00000157644 107 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Gm22944-201ENSMUST00000158662 133 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Gm22527-201ENSMUST00000158816 106 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Mir6904-201ENSMUST00000183443 67 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Gm29389-201ENSMUST00000191562 352 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Gm17991-201ENSMUST00000208139 297 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Gm19885-201ENSMUST00000212853 343 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Gm7692-201ENSMUST00000213534 409 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Col1a1P11087 Gm10298-201ENSMUST00000074801 265 ntBASIC0.79□□□□□ -2.28
Col1a1P11087 Gm12639-201ENSMUST00000121400 493 ntBASIC0.78□□□□□ -2.28
Col1a1P11087 Gm22482-201ENSMUST00000122563 359 ntBASIC0.78□□□□□ -2.28
Col1a1P11087 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.78□□□□□ -2.28
Col1a1P11087 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC0.78□□□□□ -2.28
Col1a1P11087 Gm24846-201ENSMUST00000158033 108 ntBASIC0.78□□□□□ -2.28
Col1a1P11087 Gm24768-201ENSMUST00000158512 94 ntBASIC0.78□□□□□ -2.28
Col1a1P11087 Gm27977-201ENSMUST00000185159 111 ntBASIC0.78□□□□□ -2.28
Col1a1P11087 Gm28825-201ENSMUST00000186233 238 ntBASIC0.78□□□□□ -2.28
Col1a1P11087 Gm44128-201ENSMUST00000204909 219 ntBASIC0.78□□□□□ -2.28
Col1a1P11087 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC0.78□□□□□ -2.28
Col1a1P11087 AC122225.1-201ENSMUST00000215641 369 ntBASIC0.78□□□□□ -2.28
Col1a1P11087 AC172027.1-201ENSMUST00000217659 337 ntBASIC0.78□□□□□ -2.28
Col1a1P11087 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.78□□□□□ -2.28
Col1a1P11087 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Col1a1P11087 Gm23628-201ENSMUST00000082464 173 ntBASIC0.78□□□□□ -2.28
Col1a1P11087 Gm22247-201ENSMUST00000082476 131 ntBASIC0.78□□□□□ -2.28
Col1a1P11087 Gm23650-201ENSMUST00000083355 70 ntBASIC0.78□□□□□ -2.28
Col1a1P11087 Gm13482-201ENSMUST00000119842 254 ntBASIC0.77□□□□□ -2.29
Col1a1P11087 Gm6587-201ENSMUST00000120219 613 ntBASIC0.77□□□□□ -2.29
Col1a1P11087 Gm6025-201ENSMUST00000121517 201 ntBASIC0.77□□□□□ -2.29
Col1a1P11087 Gm9001-201ENSMUST00000121642 399 ntBASIC0.77□□□□□ -2.29
Col1a1P11087 Gm23381-201ENSMUST00000157676 94 ntBASIC0.77□□□□□ -2.29
Col1a1P11087 Gm25885-201ENSMUST00000157779 109 ntBASIC0.77□□□□□ -2.29
Col1a1P11087 Gm23020-201ENSMUST00000158766 253 ntBASIC0.77□□□□□ -2.29
Col1a1P11087 Gm21171-201ENSMUST00000180048 673 ntBASIC0.77□□□□□ -2.29
Col1a1P11087 Mir6341-201ENSMUST00000183490 121 ntBASIC0.77□□□□□ -2.29
Col1a1P11087 Gm27980-201ENSMUST00000184094 169 ntBASIC0.77□□□□□ -2.29
Col1a1P11087 Gm29492-201ENSMUST00000187124 457 ntBASIC0.77□□□□□ -2.29
Col1a1P11087 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC0.77□□□□□ -2.29
Col1a1P11087 Mir1291-201ENSMUST00000199842 117 ntBASIC0.77□□□□□ -2.29
Col1a1P11087 Gm18039-201ENSMUST00000217816 728 ntBASIC0.77□□□□□ -2.29
Col1a1P11087 AC139294.2-201ENSMUST00000227159 285 ntBASIC0.77□□□□□ -2.29
Col1a1P11087 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Col1a1P11087 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Col1a1P11087 Gm13672-201ENSMUST00000117554 459 ntBASIC0.76□□□□□ -2.29
Col1a1P11087 Gm11784-201ENSMUST00000118568 474 ntBASIC0.76□□□□□ -2.29
Col1a1P11087 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC0.76□□□□□ -2.29
Col1a1P11087 Snord11-201ENSMUST00000158468 84 ntBASIC0.76□□□□□ -2.29
Col1a1P11087 Gm23339-201ENSMUST00000158962 139 ntBASIC0.76□□□□□ -2.29
Col1a1P11087 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
Col1a1P11087 Gm24264-201ENSMUST00000179835 94 ntBASIC0.76□□□□□ -2.29
Col1a1P11087 Gm28000-201ENSMUST00000184380 85 ntBASIC0.76□□□□□ -2.29
Col1a1P11087 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC0.76□□□□□ -2.29
Col1a1P11087 Gm43955-201ENSMUST00000204332 142 ntBASIC0.76□□□□□ -2.29
Col1a1P11087 Gm43944-201ENSMUST00000205220 120 ntBASIC0.76□□□□□ -2.29
Col1a1P11087 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.76□□□□□ -2.29
Col1a1P11087 Gm26055-201ENSMUST00000083038 107 ntBASIC0.76□□□□□ -2.29
Col1a1P11087 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 Gm12656-201ENSMUST00000118149 577 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 Gm22537-201ENSMUST00000158172 199 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 Traj60-201ENSMUST00000167781 54 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Col1a1P11087 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Col1a1P11087 Mir6370-201ENSMUST00000183510 120 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 Mir7091-201ENSMUST00000184075 79 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 Gm29397-201ENSMUST00000185205 333 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 Gm29288-201ENSMUST00000191582 901 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 Gm23370-202ENSMUST00000197008 129 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 Gm43402-201ENSMUST00000197159 159 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 Gm44391-201ENSMUST00000198490 93 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 CT030184.1-201ENSMUST00000222393 416 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 Gm23246-201ENSMUST00000083371 67 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 Mir29c-201ENSMUST00000083614 88 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Col1a1P11087 Gm42721-201ENSMUST00000197165 1523 ntBASIC0.75□□□□□ -2.29
Col1a1P11087 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC0.74□□□□□ -2.29
Col1a1P11087 Gm14657-201ENSMUST00000117461 302 ntBASIC0.74□□□□□ -2.29
Col1a1P11087 Gm2003-201ENSMUST00000118537 636 ntBASIC0.74□□□□□ -2.29
Col1a1P11087 Mir7683-201ENSMUST00000183842 61 ntBASIC0.74□□□□□ -2.29
Col1a1P11087 Gm44825-201ENSMUST00000207557 150 ntBASIC0.74□□□□□ -2.29
Col1a1P11087 Gm44598-201ENSMUST00000207566 150 ntBASIC0.74□□□□□ -2.29
Col1a1P11087 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC0.74□□□□□ -2.29
Col1a1P11087 AC069561.3-201ENSMUST00000217321 114 ntBASIC0.74□□□□□ -2.29
Col1a1P11087 AC154730.1-201ENSMUST00000227874 816 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms