Protein–RNA interactions for Protein: P09022

Hoxa1, Homeobox protein Hox-A1, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1P09022 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.57□□□□□ -2
Hoxa1P09022 Gm28825-201ENSMUST00000186233 238 ntBASIC2.57□□□□□ -2
Hoxa1P09022 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.57□□□□□ -2
Hoxa1P09022 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.57□□□□□ -2
Hoxa1P09022 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.57□□□□□ -2
Hoxa1P09022 Gm46997-201ENSMUST00000222108 217 ntBASIC2.57□□□□□ -2
Hoxa1P09022 AC154358.1-201ENSMUST00000224871 218 ntBASIC2.57□□□□□ -2
Hoxa1P09022 AC124746.2-201ENSMUST00000226594 427 ntBASIC2.57□□□□□ -2
Hoxa1P09022 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.57□□□□□ -2
Hoxa1P09022 Gm23727-201ENSMUST00000083352 164 ntBASIC2.57□□□□□ -2
Hoxa1P09022 Gm25896-201ENSMUST00000083713 136 ntBASIC2.57□□□□□ -2
Hoxa1P09022 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.57□□□□□ -2
Hoxa1P09022 Gm10161-201ENSMUST00000091506 204 ntBASIC2.57□□□□□ -2
Hoxa1P09022 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
Hoxa1P09022 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Hoxa1P09022 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.57□□□□□ -2
Hoxa1P09022 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hoxa1P09022 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.56□□□□□ -2
Hoxa1P09022 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Hoxa1P09022 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.56□□□□□ -2
Hoxa1P09022 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hoxa1P09022 Gm25728-201ENSMUST00000104525 159 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Gm13714-201ENSMUST00000117313 221 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Gm14020-201ENSMUST00000118165 662 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Gm12213-201ENSMUST00000119924 353 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
Hoxa1P09022 Gm22722-201ENSMUST00000157467 132 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Gm25572-201ENSMUST00000157527 172 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Gm22833-201ENSMUST00000158292 132 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hoxa1P09022 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Gm22858-201ENSMUST00000174972 76 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Spin2g-201ENSMUST00000178425 687 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hoxa1P09022 Mir6336-201ENSMUST00000183581 130 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Gm27773-201ENSMUST00000184087 78 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Mir8096-201ENSMUST00000184526 127 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC2.56□□□□□ -2
Hoxa1P09022 Gm29597-201ENSMUST00000188035 308 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Gm2077-201ENSMUST00000195017 319 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.56□□□□□ -2
Hoxa1P09022 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.56□□□□□ -2
Hoxa1P09022 Gm44524-201ENSMUST00000203899 271 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Gm18000-201ENSMUST00000212153 800 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.56□□□□□ -2
Hoxa1P09022 Snora7a-201ENSMUST00000082629 140 ntBASIC2.56□□□□□ -2
Hoxa1P09022 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hoxa1P09022 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Hoxa1P09022 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Hoxa1P09022 Gm13076-201ENSMUST00000118041 204 ntBASIC2.55□□□□□ -2
Hoxa1P09022 Gm12934-201ENSMUST00000119221 343 ntBASIC2.55□□□□□ -2
Hoxa1P09022 Gm25808-201ENSMUST00000122784 284 ntBASIC2.55□□□□□ -2
Hoxa1P09022 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Hoxa1P09022 Gm26100-201ENSMUST00000157245 127 ntBASIC2.55□□□□□ -2
Hoxa1P09022 Gm24716-201ENSMUST00000157524 104 ntBASIC2.55□□□□□ -2
Hoxa1P09022 Gm25427-201ENSMUST00000157605 103 ntBASIC2.55□□□□□ -2
Hoxa1P09022 Gm24726-201ENSMUST00000158232 121 ntBASIC2.55□□□□□ -2
Hoxa1P09022 Gm42739-201ENSMUST00000200687 226 ntBASIC2.55□□□□□ -2
Hoxa1P09022 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.55□□□□□ -2
Hoxa1P09022 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.55□□□□□ -2
Hoxa1P09022 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.55□□□□□ -2
Hoxa1P09022 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.55□□□□□ -2
Hoxa1P09022 Gm22443-201ENSMUST00000082890 107 ntBASIC2.55□□□□□ -2
Hoxa1P09022 Gm24042-201ENSMUST00000083114 103 ntBASIC2.55□□□□□ -2
Hoxa1P09022 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Hoxa1P09022 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Hoxa1P09022 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Hoxa1P09022 Gm24792-201ENSMUST00000104286 128 ntBASIC2.54□□□□□ -2
Hoxa1P09022 Gm23836-201ENSMUST00000104434 129 ntBASIC2.54□□□□□ -2
Hoxa1P09022 Gm15120-201ENSMUST00000120602 301 ntBASIC2.54□□□□□ -2
Hoxa1P09022 Gm12443-201ENSMUST00000122308 323 ntBASIC2.54□□□□□ -2
Hoxa1P09022 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.54□□□□□ -2
Hoxa1P09022 Gm29658-201ENSMUST00000185404 230 ntBASIC2.54□□□□□ -2
Hoxa1P09022 Gm28921-201ENSMUST00000190219 378 ntBASIC2.54□□□□□ -2
Hoxa1P09022 Gm44594-201ENSMUST00000208982 407 ntBASIC2.54□□□□□ -2
Hoxa1P09022 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.54□□□□□ -2
Hoxa1P09022 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.54□□□□□ -2
Hoxa1P09022 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Hoxa1P09022 Gm9765-201ENSMUST00000043170 321 ntBASIC2.54□□□□□ -2
Hoxa1P09022 Gm22062-201ENSMUST00000082563 107 ntBASIC2.54□□□□□ -2
Hoxa1P09022 Gm22739-201ENSMUST00000083437 160 ntBASIC2.54□□□□□ -2
Hoxa1P09022 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.54□□□□□ -2
Hoxa1P09022 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Hoxa1P09022 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Hoxa1P09022 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.54□□□□□ -2
Hoxa1P09022 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Hoxa1P09022 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Hoxa1P09022 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Hoxa1P09022 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.53□□□□□ -2
Hoxa1P09022 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.53□□□□□ -2
Hoxa1P09022 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Hoxa1P09022 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.53□□□□□ -2
Hoxa1P09022 Gm25875-201ENSMUST00000104323 107 ntBASIC2.53□□□□□ -2
Hoxa1P09022 Gm25565-201ENSMUST00000104605 105 ntBASIC2.53□□□□□ -2
Hoxa1P09022 Mdga2-203ENSMUST00000113942 423 ntBASIC2.53□□□□□ -2
Hoxa1P09022 Gm13761-201ENSMUST00000117238 807 ntBASIC2.53□□□□□ -2
Hoxa1P09022 Gm12617-201ENSMUST00000121268 381 ntBASIC2.53□□□□□ -2
Hoxa1P09022 Gm25269-201ENSMUST00000122601 104 ntBASIC2.53□□□□□ -2
Hoxa1P09022 Gm26477-201ENSMUST00000122617 323 ntBASIC2.53□□□□□ -2
Hoxa1P09022 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms