Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm12393-201ENSMUST00000117084 848 ntBASIC1.74□□□□□ -2.13
TnfP06804 Gm14530-201ENSMUST00000122391 333 ntBASIC1.74□□□□□ -2.13
TnfP06804 Gm23184-201ENSMUST00000122594 131 ntBASIC1.74□□□□□ -2.13
TnfP06804 Gm24837-201ENSMUST00000158683 81 ntBASIC1.74□□□□□ -2.13
TnfP06804 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.74□□□□□ -2.13
TnfP06804 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.74□□□□□ -2.13
TnfP06804 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TnfP06804 Gm28058-201ENSMUST00000186421 264 ntBASIC1.74□□□□□ -2.13
TnfP06804 Gm37361-201ENSMUST00000194345 132 ntBASIC1.74□□□□□ -2.13
TnfP06804 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.74□□□□□ -2.13
TnfP06804 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.74□□□□□ -2.13
TnfP06804 Gm45386-201ENSMUST00000210194 218 ntBASIC1.74□□□□□ -2.13
TnfP06804 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.74□□□□□ -2.13
TnfP06804 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.74□□□□□ -2.13
TnfP06804 Gm26228-201ENSMUST00000082512 107 ntBASIC1.74□□□□□ -2.13
TnfP06804 Gm25080-201ENSMUST00000082526 107 ntBASIC1.74□□□□□ -2.13
TnfP06804 Gm26265-201ENSMUST00000083277 135 ntBASIC1.74□□□□□ -2.13
TnfP06804 Gm25518-201ENSMUST00000083864 107 ntBASIC1.74□□□□□ -2.13
TnfP06804 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
TnfP06804 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.73□□□□□ -2.13
TnfP06804 Gm12304-201ENSMUST00000120312 385 ntBASIC1.73□□□□□ -2.13
TnfP06804 Gm7916-201ENSMUST00000120325 456 ntBASIC1.73□□□□□ -2.13
TnfP06804 Gm23352-201ENSMUST00000158428 64 ntBASIC1.73□□□□□ -2.13
TnfP06804 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
TnfP06804 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
TnfP06804 Gm24518-201ENSMUST00000180275 94 ntBASIC1.73□□□□□ -2.13
TnfP06804 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
TnfP06804 Gm43431-201ENSMUST00000198577 340 ntBASIC1.73□□□□□ -2.13
TnfP06804 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.73□□□□□ -2.13
TnfP06804 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.73□□□□□ -2.13
TnfP06804 Gm46312-201ENSMUST00000220961 420 ntBASIC1.73□□□□□ -2.13
TnfP06804 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
TnfP06804 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.72□□□□□ -2.13
TnfP06804 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TnfP06804 Gm24984-201ENSMUST00000104454 133 ntBASIC1.72□□□□□ -2.13
TnfP06804 Mir3096-201ENSMUST00000116685 71 ntBASIC1.72□□□□□ -2.13
TnfP06804 Gm13885-201ENSMUST00000117569 187 ntBASIC1.72□□□□□ -2.13
TnfP06804 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.72□□□□□ -2.13
TnfP06804 Gm15067-201ENSMUST00000119534 156 ntBASIC1.72□□□□□ -2.13
TnfP06804 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.72□□□□□ -2.13
TnfP06804 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TnfP06804 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TnfP06804 Gm23829-201ENSMUST00000157392 270 ntBASIC1.72□□□□□ -2.13
TnfP06804 Gm24962-201ENSMUST00000157917 109 ntBASIC1.72□□□□□ -2.13
TnfP06804 Gm23317-201ENSMUST00000157999 129 ntBASIC1.72□□□□□ -2.13
TnfP06804 Gm24885-201ENSMUST00000158783 270 ntBASIC1.72□□□□□ -2.13
TnfP06804 Gm23144-201ENSMUST00000180226 107 ntBASIC1.72□□□□□ -2.13
TnfP06804 Gm27722-201ENSMUST00000183908 76 ntBASIC1.72□□□□□ -2.13
TnfP06804 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.72□□□□□ -2.13
TnfP06804 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.72□□□□□ -2.13
TnfP06804 Mir3087-201ENSMUST00000199405 56 ntBASIC1.72□□□□□ -2.13
TnfP06804 Gm17906-201ENSMUST00000202480 901 ntBASIC1.72□□□□□ -2.13
TnfP06804 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.72□□□□□ -2.13
TnfP06804 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.72□□□□□ -2.13
TnfP06804 Gm24151-201ENSMUST00000082758 141 ntBASIC1.72□□□□□ -2.13
TnfP06804 Gm24412-201ENSMUST00000083426 109 ntBASIC1.72□□□□□ -2.13
TnfP06804 Mir320-201ENSMUST00000083594 82 ntBASIC1.72□□□□□ -2.13
TnfP06804 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.72□□□□□ -2.13
TnfP06804 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
TnfP06804 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
TnfP06804 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
TnfP06804 Gm24889-201ENSMUST00000104388 132 ntBASIC1.71□□□□□ -2.14
TnfP06804 Gm14366-201ENSMUST00000121970 730 ntBASIC1.71□□□□□ -2.14
TnfP06804 Gm13409-201ENSMUST00000122072 546 ntBASIC1.71□□□□□ -2.14
TnfP06804 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.71□□□□□ -2.14
TnfP06804 U6.1-201ENSMUST00000157443 101 ntBASIC1.71□□□□□ -2.14
TnfP06804 Gm22843-201ENSMUST00000157710 134 ntBASIC1.71□□□□□ -2.14
TnfP06804 Gm25888-201ENSMUST00000157778 302 ntBASIC1.71□□□□□ -2.14
TnfP06804 Gm25012-201ENSMUST00000158396 164 ntBASIC1.71□□□□□ -2.14
TnfP06804 Gm22851-201ENSMUST00000178741 94 ntBASIC1.71□□□□□ -2.14
TnfP06804 Gm25074-201ENSMUST00000178782 94 ntBASIC1.71□□□□□ -2.14
TnfP06804 Gm25457-201ENSMUST00000179509 107 ntBASIC1.71□□□□□ -2.14
TnfP06804 Gm27511-201ENSMUST00000183502 127 ntBASIC1.71□□□□□ -2.14
TnfP06804 Gm27878-201ENSMUST00000184000 106 ntBASIC1.71□□□□□ -2.14
TnfP06804 Gm18356-201ENSMUST00000185677 623 ntBASIC1.71□□□□□ -2.14
TnfP06804 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.71□□□□□ -2.14
TnfP06804 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.71□□□□□ -2.14
TnfP06804 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.71□□□□□ -2.14
TnfP06804 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.71□□□□□ -2.14
TnfP06804 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.71□□□□□ -2.14
TnfP06804 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.71□□□□□ -2.14
TnfP06804 AC162934.3-201ENSMUST00000223015 841 ntBASIC1.71□□□□□ -2.14
TnfP06804 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.71□□□□□ -2.14
TnfP06804 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.71□□□□□ -2.14
TnfP06804 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
TnfP06804 Gm24406-201ENSMUST00000083026 128 ntBASIC1.71□□□□□ -2.14
TnfP06804 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.71□□□□□ -2.14
TnfP06804 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.7□□□□□ -2.14
TnfP06804 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.7□□□□□ -2.14
TnfP06804 Gm13804-201ENSMUST00000119552 172 ntBASIC1.7□□□□□ -2.14
TnfP06804 Gm14709-201ENSMUST00000121225 304 ntBASIC1.7□□□□□ -2.14
TnfP06804 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.7□□□□□ -2.14
TnfP06804 Gm21885-201ENSMUST00000178891 327 ntBASIC1.7□□□□□ -2.14
TnfP06804 Gm27588-201ENSMUST00000185096 263 ntBASIC1.7□□□□□ -2.14
TnfP06804 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TnfP06804 Gm35212-201ENSMUST00000196672 606 ntBASIC1.7□□□□□ -2.14
TnfP06804 Gm43680-201ENSMUST00000199466 340 ntBASIC1.7□□□□□ -2.14
TnfP06804 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.7□□□□□ -2.14
TnfP06804 Gm45071-201ENSMUST00000205353 571 ntBASIC1.7□□□□□ -2.14
TnfP06804 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms