Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.52□□□□□ -2.17
Col5a1O88207 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Col5a1O88207 Snord38a-201ENSMUST00000083746 71 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC1.52□□□□□ -2.17
Col5a1O88207 Gm25526-201ENSMUST00000104332 132 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Snord71-201ENSMUST00000104361 85 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm12512-201ENSMUST00000119620 217 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm16428-201ENSMUST00000121193 723 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm14364-201ENSMUST00000129209 267 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC1.52□□□□□ -2.17
Col5a1O88207 Gm22929-201ENSMUST00000175517 107 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm10193-201ENSMUST00000188288 231 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.52□□□□□ -2.17
Col5a1O88207 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col5a1O88207 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.52□□□□□ -2.17
Col5a1O88207 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Col5a1O88207 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Col5a1O88207 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Col5a1O88207 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Gm43924-201ENSMUST00000204851 1736 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Gm12386-201ENSMUST00000117380 688 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Gm15282-201ENSMUST00000117707 300 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Gm12806-201ENSMUST00000119384 268 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Gm13804-201ENSMUST00000119552 172 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Gm26101-201ENSMUST00000157246 105 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Gm23083-201ENSMUST00000157851 116 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Gm22769-201ENSMUST00000158367 98 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Gm24713-201ENSMUST00000178850 107 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Gm25448-201ENSMUST00000180065 107 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC1.51□□□□□ -2.17
Col5a1O88207 Gm43624-201ENSMUST00000197368 180 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC1.51□□□□□ -2.17
Col5a1O88207 Gm20102-201ENSMUST00000222445 220 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Gm22572-201ENSMUST00000082985 105 ntBASIC1.51□□□□□ -2.17
Col5a1O88207 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Col5a1O88207 Gm14657-201ENSMUST00000117461 302 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm11367-201ENSMUST00000117802 120 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm8217-201ENSMUST00000119136 465 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm13475-201ENSMUST00000119290 234 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm14574-201ENSMUST00000120644 279 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm5287-201ENSMUST00000120666 598 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm14678-201ENSMUST00000121396 482 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC1.5□□□□□ -2.17
Col5a1O88207 Gm25909-201ENSMUST00000157619 121 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm23078-201ENSMUST00000157848 148 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm24419-201ENSMUST00000157875 332 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm24853-201ENSMUST00000158026 121 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm23068-201ENSMUST00000158239 293 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.5□□□□□ -2.17
Col5a1O88207 Gm9071-201ENSMUST00000165915 474 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm24464-201ENSMUST00000179697 107 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm23144-201ENSMUST00000180226 107 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm27245-201ENSMUST00000184385 376 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm34015-201ENSMUST00000194908 451 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm44353-201ENSMUST00000200618 138 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 AC147633.1-201ENSMUST00000225134 259 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Col5a1O88207 Gm23096-201ENSMUST00000083447 107 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm22866-201ENSMUST00000083947 177 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Mir343-201ENSMUST00000102360 75 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm42606-201ENSMUST00000114209 239 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm14670-201ENSMUST00000117327 337 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm13046-201ENSMUST00000117391 501 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm25279-201ENSMUST00000122608 133 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm13901-201ENSMUST00000137252 468 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Col5a1O88207 Gm24784-201ENSMUST00000157640 62 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm25958-201ENSMUST00000175114 71 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Col5a1O88207 Gm4076-201ENSMUST00000179230 965 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm21726-201ENSMUST00000179654 392 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm22633-201ENSMUST00000179834 107 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Col5a1O88207 Gm27588-201ENSMUST00000185096 263 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC1.5□□□□□ -2.17
Col5a1O88207 Gm37568-201ENSMUST00000191755 364 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm18956-201ENSMUST00000192857 480 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm37523-201ENSMUST00000194901 412 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 Gm44909-201ENSMUST00000208756 165 ntBASIC1.5□□□□□ -2.17
Col5a1O88207 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.5□□□□□ -2.17
Col5a1O88207 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.5□□□□□ -2.17
Col5a1O88207 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC1.49□□□□□ -2.17
Col5a1O88207 Gm11813-201ENSMUST00000118586 291 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 Gm5937-201ENSMUST00000119715 643 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 Gm15037-201ENSMUST00000120358 259 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms