Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm38311-201ENSMUST00000192945 165 ntBASIC2.31□□□□□ -2.04
Trav13d-3J3QMG8 Gm37807-201ENSMUST00000194310 190 ntBASIC2.31□□□□□ -2.04
Trav13d-3J3QMG8 Gm44526-201ENSMUST00000204664 121 ntBASIC2.31□□□□□ -2.04
Trav13d-3J3QMG8 Gm45678-201ENSMUST00000210509 295 ntBASIC2.31□□□□□ -2.04
Trav13d-3J3QMG8 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.31□□□□□ -2.04
Trav13d-3J3QMG8 Gm40810-201ENSMUST00000219149 253 ntBASIC2.31□□□□□ -2.04
Trav13d-3J3QMG8 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.31□□□□□ -2.04
Trav13d-3J3QMG8 AC154245.1-201ENSMUST00000224615 601 ntBASIC2.31□□□□□ -2.04
Trav13d-3J3QMG8 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.31□□□□□ -2.04
Trav13d-3J3QMG8 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Trav13d-3J3QMG8 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trav13d-3J3QMG8 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trav13d-3J3QMG8 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trav13d-3J3QMG8 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Gm22021-201ENSMUST00000104353 107 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Gm6954-201ENSMUST00000117416 225 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Gm16021-201ENSMUST00000121176 219 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Gm25454-201ENSMUST00000157947 315 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Gm24005-201ENSMUST00000158459 296 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Gm26215-201ENSMUST00000158584 139 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Gm20462-201ENSMUST00000172623 408 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Gm9174-201ENSMUST00000078149 255 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Gm22249-201ENSMUST00000082485 136 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Snord42a-201ENSMUST00000082606 65 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.3□□□□□ -2.04
Trav13d-3J3QMG8 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Gm15010-201ENSMUST00000117153 407 ntBASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Gm13672-201ENSMUST00000117554 459 ntBASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Gm11798-201ENSMUST00000119150 421 ntBASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Gm25486-201ENSMUST00000158726 63 ntBASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Gm27410-201ENSMUST00000183851 115 ntBASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Mir7k-201ENSMUST00000184115 110 ntBASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Gm37313-201ENSMUST00000191673 290 ntBASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Gm44393-201ENSMUST00000197418 138 ntBASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Gm32222-201ENSMUST00000203296 298 ntBASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Gm44478-201ENSMUST00000204875 114 ntBASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Gm10025-201ENSMUST00000079568 372 ntBASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trav13d-3J3QMG8 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Gm24499-201ENSMUST00000158446 104 ntBASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Mir3965-201ENSMUST00000175570 69 ntBASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Gm37162-201ENSMUST00000191708 551 ntBASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Gm15235-201ENSMUST00000200572 194 ntBASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Gm44425-201ENSMUST00000203739 429 ntBASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Gm23453-201ENSMUST00000083326 106 ntBASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Gm26164-201ENSMUST00000083793 104 ntBASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Gm23847-201ENSMUST00000083829 110 ntBASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
Trav13d-3J3QMG8 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.28□□□□□ -2.05
Trav13d-3J3QMG8 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 Mir669l-201ENSMUST00000103771 98 ntBASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 Gm14770-201ENSMUST00000122197 312 ntBASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 Gm22538-201ENSMUST00000158169 299 ntBASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 Gm22085-201ENSMUST00000158344 110 ntBASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 Gm23024-201ENSMUST00000158770 292 ntBASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 Gm21978-201ENSMUST00000179696 377 ntBASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 Gm27505-201ENSMUST00000185071 110 ntBASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 Gm28661-201ENSMUST00000188231 681 ntBASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 Gm43505-201ENSMUST00000200579 139 ntBASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 Gm44024-201ENSMUST00000203008 476 ntBASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 Gm45879-201ENSMUST00000212521 392 ntBASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.27□□□□□ -2.05
Trav13d-3J3QMG8 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms