Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Pcdh1F7BJK1 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm22758-201ENSMUST00000102275 96 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm23532-201ENSMUST00000104569 112 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm14687-201ENSMUST00000120206 363 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm12304-201ENSMUST00000120312 385 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm12858-201ENSMUST00000121913 208 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm26027-201ENSMUST00000122725 268 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm22816-201ENSMUST00000157450 117 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm22097-201ENSMUST00000157929 278 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm25436-201ENSMUST00000158275 145 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm22367-201ENSMUST00000178930 132 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm10292-201ENSMUST00000183142 581 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm37001-201ENSMUST00000193377 190 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm44650-201ENSMUST00000206929 194 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm18213-201ENSMUST00000207850 178 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm44563-201ENSMUST00000207958 178 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm23462-201ENSMUST00000083264 104 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Mir208a-201ENSMUST00000083498 83 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Pcdh1F7BJK1 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Gm23271-201ENSMUST00000104052 124 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Gm25879-201ENSMUST00000104330 107 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Gm22613-201ENSMUST00000122679 292 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Gm22883-201ENSMUST00000157376 106 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Gm24961-201ENSMUST00000157918 184 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Gm22767-201ENSMUST00000158365 165 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Mir5127-201ENSMUST00000175295 71 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Mir1251-201ENSMUST00000175486 84 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Mir669k-201ENSMUST00000177742 127 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Gm25673-201ENSMUST00000179957 127 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Gm27851-201ENSMUST00000183529 63 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Gm43746-201ENSMUST00000200028 317 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Mir146-201ENSMUST00000083667 65 ntBASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Pcdh1F7BJK1 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Gm23273-201ENSMUST00000104058 135 ntBASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Gm12443-201ENSMUST00000122308 323 ntBASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Gm25438-201ENSMUST00000158281 110 ntBASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Gm22531-201ENSMUST00000158819 140 ntBASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Gm16289-201ENSMUST00000162079 183 ntBASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Gm25071-201ENSMUST00000175232 70 ntBASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Mir466b-1-201ENSMUST00000177988 82 ntBASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Gm27470-201ENSMUST00000184070 210 ntBASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Gm28825-201ENSMUST00000186233 238 ntBASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Gm10298-201ENSMUST00000074801 265 ntBASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Mir302d-201ENSMUST00000083513 66 ntBASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Gm23850-201ENSMUST00000083830 169 ntBASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Pcdh1F7BJK1 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Gm24586-201ENSMUST00000116695 89 ntBASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Gm12550-201ENSMUST00000118478 329 ntBASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Gm24716-201ENSMUST00000157524 104 ntBASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Gm23277-201ENSMUST00000157914 136 ntBASIC3.24□□□□□ -1.89
Pcdh1F7BJK1 Gm25920-201ENSMUST00000158307 99 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms