Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm28843-201ENSMUST00000189198 678 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm29546-201ENSMUST00000191171 678 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm38208-201ENSMUST00000192476 114 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm29740-201ENSMUST00000193182 655 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm45387-201ENSMUST00000209792 632 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm45374-201ENSMUST00000211388 136 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 AC161758.1-201ENSMUST00000226123 310 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 CT009733.1-201ENSMUST00000225322 425 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.17□□□□□ -2.38
Col6a3E9PWQ3 Gm7350-201ENSMUST00000120964 636 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm18354-201ENSMUST00000173515 1068 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 AC153864.2-201ENSMUST00000220424 292 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm23907-201ENSMUST00000104595 189 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm17154-201ENSMUST00000165748 431 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm29299-201ENSMUST00000185609 923 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm44954-201ENSMUST00000208513 227 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm23761-201ENSMUST00000158347 104 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm45366-201ENSMUST00000209828 384 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm14442-201ENSMUST00000119690 1736 ntBASIC0.16□□□□□ -2.38
Col6a3E9PWQ3 Gm25621-201ENSMUST00000157223 114 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm24915-201ENSMUST00000157288 78 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm23208-201ENSMUST00000158666 127 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm24221-201ENSMUST00000158833 313 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm26157-201ENSMUST00000158974 126 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm34139-201ENSMUST00000196166 294 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm42625-201ENSMUST00000198611 922 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Snora41-201ENSMUST00000082668 132 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm13806-201ENSMUST00000117822 325 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm20794-201ENSMUST00000177626 628 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm28356-202ENSMUST00000187566 858 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm20885-201ENSMUST00000190192 654 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm33571-201ENSMUST00000193271 657 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm36866-201ENSMUST00000193343 657 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm36047-201ENSMUST00000193659 657 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm20857-201ENSMUST00000194766 657 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm20858-201ENSMUST00000195459 657 ntBASIC0.15□□□□□ -2.39
Col6a3E9PWQ3 Gm30638-201ENSMUST00000195570 656 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms