Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 AC115878.1-201ENSMUST00000227247 334 ntBASIC0.16□□□□□ -2.38
Col6a5A6H584 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col6a5A6H584 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
Col6a5A6H584 Snord91a-201ENSMUST00000104305 93 ntBASIC0.15□□□□□ -2.39
Col6a5A6H584 Gm14674-201ENSMUST00000117816 342 ntBASIC0.15□□□□□ -2.39
Col6a5A6H584 Gm6664-201ENSMUST00000119138 468 ntBASIC0.15□□□□□ -2.39
Col6a5A6H584 Gm44384-201ENSMUST00000200208 114 ntBASIC0.15□□□□□ -2.39
Col6a5A6H584 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
Col6a5A6H584 Gm46193-201ENSMUST00000219399 364 ntBASIC0.15□□□□□ -2.39
Col6a5A6H584 Gm25856-201ENSMUST00000082786 75 ntBASIC0.15□□□□□ -2.39
Col6a5A6H584 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.39
Col6a5A6H584 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
Col6a5A6H584 Gm26213-201ENSMUST00000158582 110 ntBASIC0.15□□□□□ -2.39
Col6a5A6H584 Gm18588-201ENSMUST00000177308 492 ntBASIC0.15□□□□□ -2.39
Col6a5A6H584 Gm6113-201ENSMUST00000180319 639 ntBASIC0.15□□□□□ -2.39
Col6a5A6H584 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
Col6a5A6H584 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC0.15□□□□□ -2.39
Col6a5A6H584 Gm42855-201ENSMUST00000197388 253 ntBASIC0.15□□□□□ -2.39
Col6a5A6H584 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.15□□□□□ -2.39
Col6a5A6H584 Gm4732-201ENSMUST00000118778 473 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm15312-201ENSMUST00000118827 271 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm14946-201ENSMUST00000119859 296 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm22553-201ENSMUST00000157797 295 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm3010-201ENSMUST00000198805 448 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm25431-201ENSMUST00000101978 107 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm14269-201ENSMUST00000120455 306 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm13460-201ENSMUST00000121274 353 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm22516-201ENSMUST00000158266 124 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm23207-201ENSMUST00000158665 102 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm23477-201ENSMUST00000158882 128 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm17119-201ENSMUST00000163943 280 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Mir7055-201ENSMUST00000197423 59 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC0.14□□□□□ -2.39
Col6a5A6H584 AC132121.1-201ENSMUST00000220774 332 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm23299-201ENSMUST00000082708 79 ntBASIC0.14□□□□□ -2.39
Col6a5A6H584 Gm23482-201ENSMUST00000104172 122 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 Gm23907-201ENSMUST00000104595 189 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 Gm6587-201ENSMUST00000120219 613 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 Gm27660-201ENSMUST00000184028 208 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC0.13□□□□□ -2.39
Col6a5A6H584 Gm37000-201ENSMUST00000193058 428 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 Gm37771-201ENSMUST00000193121 265 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 Gm2142-201ENSMUST00000197899 589 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 AC155314.1-201ENSMUST00000227624 508 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
Col6a5A6H584 Gm16431-201ENSMUST00000117454 431 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 Gm14800-201ENSMUST00000122084 1272 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 Gm22082-201ENSMUST00000157587 161 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
Col6a5A6H584 Gm44088-201ENSMUST00000204595 237 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 AC167140.1-201ENSMUST00000224710 403 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 Gm26224-201ENSMUST00000082506 80 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 Gm24805-201ENSMUST00000082931 104 ntBASIC0.13□□□□□ -2.39
Col6a5A6H584 n-R5s171-201ENSMUST00000104128 79 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm25309-201ENSMUST00000116728 126 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm15807-201ENSMUST00000119880 1128 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm15177-201ENSMUST00000120491 577 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm15719-201ENSMUST00000120619 635 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm25557-201ENSMUST00000158084 315 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Mir3470a-201ENSMUST00000175223 77 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm43432-201ENSMUST00000196352 121 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm42925-201ENSMUST00000197359 285 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC0.12□□□□□ -2.39
Col6a5A6H584 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm18268-201ENSMUST00000208445 943 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 AC101945.3-201ENSMUST00000226568 153 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm12137-201ENSMUST00000119565 346 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm12105-201ENSMUST00000120846 779 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm25898-201ENSMUST00000158303 106 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Col6a5A6H584 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm18354-201ENSMUST00000173515 1068 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm27722-201ENSMUST00000183908 76 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm29432-201ENSMUST00000185397 139 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm43228-201ENSMUST00000200735 264 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm19118-201ENSMUST00000222554 98 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
Col6a5A6H584 Gm22884-201ENSMUST00000083127 140 ntBASIC0.12□□□□□ -2.39
Col6a5A6H584 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Col6a5A6H584 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
Col6a5A6H584 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
Col6a5A6H584 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
Col6a5A6H584 Gm15211-201ENSMUST00000118932 528 ntBASIC0.11□□□□□ -2.39
Col6a5A6H584 Gm14791-201ENSMUST00000119061 1166 ntBASIC0.11□□□□□ -2.39
Col6a5A6H584 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC0.11□□□□□ -2.39
Col6a5A6H584 Gm22522-201ENSMUST00000158271 151 ntBASIC0.11□□□□□ -2.39
Col6a5A6H584 Gm27864-201ENSMUST00000183704 190 ntBASIC0.11□□□□□ -2.39
Col6a5A6H584 Gm5329-201ENSMUST00000186898 463 ntBASIC0.11□□□□□ -2.39
Col6a5A6H584 Gm38109-201ENSMUST00000195386 181 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms