Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 Gm43199-201ENSMUST00000200019 307 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Ubr4A2AN08 Mir3108-201ENSMUST00000175500 79 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 Gm44455-201ENSMUST00000200061 82 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Ubr4A2AN08 Snora41-201ENSMUST00000082668 132 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 Gm13804-201ENSMUST00000119552 172 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 Gm24464-201ENSMUST00000179697 107 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
Ubr4A2AN08 Gm44349-201ENSMUST00000197048 123 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC0.04□□□□□ -2.4
Ubr4A2AN08 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC0.04□□□□□ -2.4
Ubr4A2AN08 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 AC158388.1-201ENSMUST00000225441 256 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 Gm22169-201ENSMUST00000083229 107 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 Gm23850-201ENSMUST00000083830 169 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 Gm26395-201ENSMUST00000104094 132 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC0.04□□□□□ -2.4
Ubr4A2AN08 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.04□□□□□ -2.4
Ubr4A2AN08 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 AC122295.1-201ENSMUST00000223476 388 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 Mir301-201ENSMUST00000083655 86 ntBASIC0.04□□□□□ -2.4
Ubr4A2AN08 Gm26484-201ENSMUST00000158018 106 ntBASIC0.03□□□□□ -2.4
Ubr4A2AN08 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC0.03□□□□□ -2.4
Ubr4A2AN08 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC0.03□□□□□ -2.4
Ubr4A2AN08 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
Ubr4A2AN08 Mir1291-201ENSMUST00000199842 117 ntBASIC0.03□□□□□ -2.4
Ubr4A2AN08 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.03□□□□□ -2.4
Ubr4A2AN08 Gm22151-201ENSMUST00000116963 58 ntBASIC0.03□□□□□ -2.4
Ubr4A2AN08 Gm25968-201ENSMUST00000157167 100 ntBASIC0.03□□□□□ -2.4
Ubr4A2AN08 Gm25961-201ENSMUST00000157174 135 ntBASIC0.03□□□□□ -2.4
Ubr4A2AN08 Gm44336-201ENSMUST00000203696 468 ntBASIC0.03□□□□□ -2.4
Ubr4A2AN08 Gm19118-201ENSMUST00000222554 98 ntBASIC0.03□□□□□ -2.4
Ubr4A2AN08 AC116395.1-201ENSMUST00000225480 1143 ntBASIC0.03□□□□□ -2.4
Ubr4A2AN08 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Ubr4A2AN08 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
Ubr4A2AN08 AC153864.2-201ENSMUST00000220424 292 ntBASIC0.03□□□□□ -2.4
Ubr4A2AN08 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.03□□□□□ -2.4
Ubr4A2AN08 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Ubr4A2AN08 Gm12392-201ENSMUST00000118014 938 ntBASIC0.03□□□□□ -2.41
Ubr4A2AN08 Gm14713-201ENSMUST00000122362 686 ntBASIC0.03□□□□□ -2.41
Ubr4A2AN08 Gm25520-201ENSMUST00000158389 118 ntBASIC0.03□□□□□ -2.41
Ubr4A2AN08 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
Ubr4A2AN08 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC0.03□□□□□ -2.41
Ubr4A2AN08 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC0.03□□□□□ -2.41
Ubr4A2AN08 CT009764.1-201ENSMUST00000222260 483 ntBASIC0.03□□□□□ -2.41
Ubr4A2AN08 Mir695-201ENSMUST00000102261 109 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
Ubr4A2AN08 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm10925-201ENSMUST00000189941 678 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Ubr4A2AN08 AC124746.1-201ENSMUST00000227535 1300 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm17119-201ENSMUST00000163943 280 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm27582-201ENSMUST00000184084 126 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm23181-201ENSMUST00000158685 110 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm27236-201ENSMUST00000184147 442 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm37000-201ENSMUST00000193058 428 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm19709-201ENSMUST00000215403 482 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC0.02□□□□□ -2.41
Ubr4A2AN08 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Ubr4A2AN08 Mir653-201ENSMUST00000102402 85 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm15312-201ENSMUST00000118827 271 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm23172-201ENSMUST00000157160 124 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm24678-201ENSMUST00000158756 104 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm21815-201ENSMUST00000178213 664 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm28843-201ENSMUST00000189198 678 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Ubr4A2AN08 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm29546-201ENSMUST00000191171 678 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm29740-201ENSMUST00000193182 655 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.02□□□□□ -2.41
Ubr4A2AN08 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.01□□□□□ -2.41
Ubr4A2AN08 Gm25601-201ENSMUST00000158356 105 ntBASIC0.01□□□□□ -2.41
Ubr4A2AN08 Gm23339-201ENSMUST00000158962 139 ntBASIC0.01□□□□□ -2.41
Ubr4A2AN08 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC0.01□□□□□ -2.41
Ubr4A2AN08 Gm29005-201ENSMUST00000186773 320 ntBASIC0.01□□□□□ -2.41
Ubr4A2AN08 Gm5329-201ENSMUST00000186898 463 ntBASIC0.01□□□□□ -2.41
Ubr4A2AN08 Gm44326-201ENSMUST00000198226 101 ntBASIC0.01□□□□□ -2.41
Ubr4A2AN08 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
Ubr4A2AN08 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Ubr4A2AN08 Mir126a-201ENSMUST00000083606 73 ntBASIC0.01□□□□□ -2.41
Ubr4A2AN08 Mir717-201ENSMUST00000102259 109 ntBASIC0.01□□□□□ -2.41
Ubr4A2AN08 Mir147-201ENSMUST00000102354 79 ntBASIC0.01□□□□□ -2.41
Ubr4A2AN08 Gm14868-201ENSMUST00000117840 216 ntBASIC0.01□□□□□ -2.41
Ubr4A2AN08 Gm11845-201ENSMUST00000117886 327 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms