Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Trav12-1A0N8R1 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.52□□□□□ -2.33
Trav12-1A0N8R1 Gm16038-201ENSMUST00000159317 193 ntBASIC0.52□□□□□ -2.33
Trav12-1A0N8R1 Mir7663-201ENSMUST00000183950 61 ntBASIC0.52□□□□□ -2.33
Trav12-1A0N8R1 Gm37568-201ENSMUST00000191755 364 ntBASIC0.52□□□□□ -2.33
Trav12-1A0N8R1 Gm42533-201ENSMUST00000196247 157 ntBASIC0.52□□□□□ -2.33
Trav12-1A0N8R1 Gm43911-201ENSMUST00000203097 76 ntBASIC0.52□□□□□ -2.33
Trav12-1A0N8R1 Gm45439-201ENSMUST00000211723 359 ntBASIC0.52□□□□□ -2.33
Trav12-1A0N8R1 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.52□□□□□ -2.33
Trav12-1A0N8R1 AC122901.2-201ENSMUST00000216926 285 ntBASIC0.52□□□□□ -2.33
Trav12-1A0N8R1 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.52□□□□□ -2.33
Trav12-1A0N8R1 Gm22061-201ENSMUST00000082557 107 ntBASIC0.52□□□□□ -2.33
Trav12-1A0N8R1 Gm25755-201ENSMUST00000083396 107 ntBASIC0.52□□□□□ -2.33
Trav12-1A0N8R1 Gm25506-201ENSMUST00000104339 70 ntBASIC0.51□□□□□ -2.33
Trav12-1A0N8R1 Gm22496-201ENSMUST00000104493 88 ntBASIC0.51□□□□□ -2.33
Trav12-1A0N8R1 Gm12449-201ENSMUST00000117572 234 ntBASIC0.51□□□□□ -2.33
Trav12-1A0N8R1 Gm13457-201ENSMUST00000117885 267 ntBASIC0.51□□□□□ -2.33
Trav12-1A0N8R1 Gm7429-201ENSMUST00000118664 348 ntBASIC0.51□□□□□ -2.33
Trav12-1A0N8R1 Gm11572-201ENSMUST00000119164 120 ntBASIC0.51□□□□□ -2.33
Trav12-1A0N8R1 Gm23208-201ENSMUST00000158666 127 ntBASIC0.51□□□□□ -2.33
Trav12-1A0N8R1 Gm21815-201ENSMUST00000178213 664 ntBASIC0.51□□□□□ -2.33
Trav12-1A0N8R1 Gm25175-201ENSMUST00000178712 79 ntBASIC0.51□□□□□ -2.33
Trav12-1A0N8R1 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC0.51□□□□□ -2.33
Trav12-1A0N8R1 Gm43250-201ENSMUST00000196536 273 ntBASIC0.51□□□□□ -2.33
Trav12-1A0N8R1 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.51□□□□□ -2.33
Trav12-1A0N8R1 Gm25038-201ENSMUST00000082928 130 ntBASIC0.51□□□□□ -2.33
Trav12-1A0N8R1 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Trav12-1A0N8R1 AC124456.1-201ENSMUST00000217391 2597 ntBASIC0.5□□□□□ -2.33
Trav12-1A0N8R1 Gm14793-201ENSMUST00000118739 311 ntBASIC0.5□□□□□ -2.33
Trav12-1A0N8R1 Gm14979-201ENSMUST00000121561 1035 ntBASIC0.5□□□□□ -2.33
Trav12-1A0N8R1 Gm23328-201ENSMUST00000157418 132 ntBASIC0.5□□□□□ -2.33
Trav12-1A0N8R1 Gm22389-201ENSMUST00000158193 301 ntBASIC0.5□□□□□ -2.33
Trav12-1A0N8R1 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.5□□□□□ -2.33
Trav12-1A0N8R1 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
Trav12-1A0N8R1 Mir7050-201ENSMUST00000184636 60 ntBASIC0.5□□□□□ -2.33
Trav12-1A0N8R1 Mir7059-201ENSMUST00000184825 59 ntBASIC0.5□□□□□ -2.33
Trav12-1A0N8R1 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.5□□□□□ -2.33
Trav12-1A0N8R1 Mir216a-201ENSMUST00000083605 72 ntBASIC0.5□□□□□ -2.33
Trav12-1A0N8R1 Gm37096-201ENSMUST00000192317 2058 ntBASIC0.5□□□□□ -2.33
Trav12-1A0N8R1 Gm24588-201ENSMUST00000116696 83 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm12304-201ENSMUST00000120312 385 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm13992-201ENSMUST00000120558 156 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm15167-201ENSMUST00000121997 187 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm16265-201ENSMUST00000134558 108 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm26349-201ENSMUST00000157530 130 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm22551-201ENSMUST00000157795 103 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm24747-201ENSMUST00000157835 87 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm25012-201ENSMUST00000158396 164 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm37005-201ENSMUST00000193281 1164 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm38146-201ENSMUST00000194121 1293 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm42647-201ENSMUST00000195939 459 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm42509-201ENSMUST00000197390 781 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm43245-201ENSMUST00000197603 468 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm35736-201ENSMUST00000203681 313 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Gm45878-201ENSMUST00000211839 241 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
Trav12-1A0N8R1 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Trav12-1A0N8R1 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC0.48□□□□□ -2.33
Trav12-1A0N8R1 Gm12370-201ENSMUST00000117809 604 ntBASIC0.48□□□□□ -2.33
Trav12-1A0N8R1 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.48□□□□□ -2.33
Trav12-1A0N8R1 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Trav12-1A0N8R1 Gm42570-201ENSMUST00000195937 292 ntBASIC0.48□□□□□ -2.33
Trav12-1A0N8R1 Gm44336-201ENSMUST00000203696 468 ntBASIC0.48□□□□□ -2.33
Trav12-1A0N8R1 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.48□□□□□ -2.33
Trav12-1A0N8R1 Gm26224-201ENSMUST00000082506 80 ntBASIC0.48□□□□□ -2.33
Trav12-1A0N8R1 Snord1a-201ENSMUST00000083160 74 ntBASIC0.48□□□□□ -2.33
Trav12-1A0N8R1 Gm14797-201ENSMUST00000119378 1480 ntBASIC0.48□□□□□ -2.33
Trav12-1A0N8R1 Gm24282-201ENSMUST00000104232 66 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm12432-201ENSMUST00000119540 186 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm3788-201ENSMUST00000119949 136 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm26000-201ENSMUST00000157991 107 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm22515-201ENSMUST00000158273 305 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm28409-201ENSMUST00000187064 103 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm29037-201ENSMUST00000189092 313 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm44865-201ENSMUST00000207240 531 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm18188-201ENSMUST00000219386 478 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 AC152979.4-201ENSMUST00000219893 379 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm22974-201ENSMUST00000083301 103 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm23102-201ENSMUST00000083724 116 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm25008-201ENSMUST00000083809 81 ntBASIC0.47□□□□□ -2.33
Trav12-1A0N8R1 Gm11813-201ENSMUST00000118586 291 ntBASIC0.46□□□□□ -2.34
Trav12-1A0N8R1 Mup-ps15-201ENSMUST00000121741 539 ntBASIC0.46□□□□□ -2.34
Trav12-1A0N8R1 Gm26414-201ENSMUST00000157674 269 ntBASIC0.46□□□□□ -2.34
Trav12-1A0N8R1 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
Trav12-1A0N8R1 Gm25457-201ENSMUST00000179509 107 ntBASIC0.46□□□□□ -2.34
Trav12-1A0N8R1 Gm29492-201ENSMUST00000187124 457 ntBASIC0.46□□□□□ -2.34
Trav12-1A0N8R1 Gm37578-201ENSMUST00000192256 1177 ntBASIC0.46□□□□□ -2.34
Trav12-1A0N8R1 Gm18160-201ENSMUST00000214279 827 ntBASIC0.46□□□□□ -2.34
Trav12-1A0N8R1 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.46□□□□□ -2.34
Trav12-1A0N8R1 AC147633.1-201ENSMUST00000225134 259 ntBASIC0.46□□□□□ -2.34
Trav12-1A0N8R1 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.45□□□□□ -2.34
Trav12-1A0N8R1 Gm23836-201ENSMUST00000104434 129 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms