Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm26226-201ENSMUST00000082509 116 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 DQ267101-201ENSMUST00000082562 73 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm26326-201ENSMUST00000083070 129 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm26265-201ENSMUST00000083277 135 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm24258-201ENSMUST00000083739 133 ntBASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.07□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm25876-201ENSMUST00000104329 119 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Mir208b-201ENSMUST00000104735 77 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm15309-201ENSMUST00000121644 240 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm23656-201ENSMUST00000122626 112 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm25914-201ENSMUST00000157618 153 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm25243-201ENSMUST00000174912 207 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm23967-201ENSMUST00000175062 78 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm29575-201ENSMUST00000190597 315 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm37005-201ENSMUST00000193281 1164 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm44754-201ENSMUST00000208155 400 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 AC157017.2-201ENSMUST00000218354 777 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm22247-201ENSMUST00000082476 131 ntBASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.06□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm25378-201ENSMUST00000104333 129 ntBASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm14013-201ENSMUST00000119006 270 ntBASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm12825-201ENSMUST00000120249 563 ntBASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm25393-201ENSMUST00000157336 285 ntBASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm24678-201ENSMUST00000158756 104 ntBASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm24875-201ENSMUST00000158888 104 ntBASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm23419-201ENSMUST00000175523 84 ntBASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Mir6240-201ENSMUST00000184281 117 ntBASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm18160-201ENSMUST00000214279 827 ntBASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm18696-201ENSMUST00000220103 274 ntBASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm25411-201ENSMUST00000083760 151 ntBASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC0.05□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm24582-201ENSMUST00000103967 103 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm22091-201ENSMUST00000116908 127 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm14937-201ENSMUST00000119709 208 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm15167-201ENSMUST00000121997 187 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm25115-201ENSMUST00000157187 140 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm23473-201ENSMUST00000158883 116 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm23267-201ENSMUST00000178490 132 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm24264-201ENSMUST00000179835 94 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm18747-201ENSMUST00000198129 648 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm18410-201ENSMUST00000207199 577 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm35262-201ENSMUST00000215133 267 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm45965-201ENSMUST00000221192 1284 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
Trav4-3A0A0B4J1K1 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC0.03□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm14566-201ENSMUST00000118915 321 ntBASIC0.03□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm25663-201ENSMUST00000157698 135 ntBASIC0.03□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC0.03□□□□□ -2.4
Trav4-3A0A0B4J1K1 Mir1954-201ENSMUST00000175595 86 ntBASIC0.03□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm18415-201ENSMUST00000177464 647 ntBASIC0.03□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm21827-201ENSMUST00000178247 423 ntBASIC0.03□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm28921-201ENSMUST00000190219 378 ntBASIC0.03□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm37946-201ENSMUST00000192064 347 ntBASIC0.03□□□□□ -2.4
Trav4-3A0A0B4J1K1 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.03□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm7443-201ENSMUST00000206355 378 ntBASIC0.03□□□□□ -2.4
Trav4-3A0A0B4J1K1 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC0.03□□□□□ -2.4
Trav4-3A0A0B4J1K1 CT009733.1-201ENSMUST00000225322 425 ntBASIC0.03□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm23939-201ENSMUST00000082880 133 ntBASIC0.03□□□□□ -2.4
Trav4-3A0A0B4J1K1 Gm13378-201ENSMUST00000117483 336 ntBASIC0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm13454-201ENSMUST00000118166 483 ntBASIC0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Mir28b-201ENSMUST00000175399 80 ntBASIC0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm29492-201ENSMUST00000187124 457 ntBASIC0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm29389-201ENSMUST00000191562 352 ntBASIC0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Mir3087-201ENSMUST00000199405 56 ntBASIC0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm29815-201ENSMUST00000202418 178 ntBASIC0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm44211-201ENSMUST00000204867 145 ntBASIC0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm34783-201ENSMUST00000209159 303 ntBASIC0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 AC135292.1-201ENSMUST00000227665 204 ntBASIC0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.02□□□□□ -2.41
Trav4-3A0A0B4J1K1 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm22779-201ENSMUST00000104085 107 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm2348-201ENSMUST00000108782 300 ntBASIC0.01□□□□□ -2.41
Trav4-3A0A0B4J1K1 Gm11363-201ENSMUST00000121672 548 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms