Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.42□□□□□ -2.18
Trbv1A0A0B4J1G7 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm15266-201ENSMUST00000119635 255 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm13409-201ENSMUST00000122072 546 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 U6.1-201ENSMUST00000157443 101 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm25642-201ENSMUST00000175137 66 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm27660-201ENSMUST00000184028 208 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm27588-201ENSMUST00000185096 263 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Trbv22-201ENSMUST00000191697 291 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 AC124542.1-201ENSMUST00000205588 908 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm44844-201ENSMUST00000207242 336 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm45730-201ENSMUST00000212560 395 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm35558-203ENSMUST00000222264 204 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Gm25788-201ENSMUST00000082721 131 ntBASIC1.41□□□□□ -2.18
Trbv1A0A0B4J1G7 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
Trbv1A0A0B4J1G7 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Trbv1A0A0B4J1G7 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.18
Trbv1A0A0B4J1G7 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm14766-201ENSMUST00000121689 367 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm11358-201ENSMUST00000122310 373 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm24572-201ENSMUST00000175505 88 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm22166-201ENSMUST00000178419 121 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm23288-201ENSMUST00000179213 121 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm22631-201ENSMUST00000179656 94 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm21978-201ENSMUST00000179696 377 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm5900-201ENSMUST00000179862 375 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm27511-201ENSMUST00000183502 127 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm29073-201ENSMUST00000185563 664 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm29165-201ENSMUST00000190655 664 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm29211-201ENSMUST00000191470 664 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm37377-201ENSMUST00000191733 304 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm38261-201ENSMUST00000192608 316 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm45071-201ENSMUST00000205353 571 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm15010-201ENSMUST00000117153 407 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm12926-201ENSMUST00000121158 409 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm11363-201ENSMUST00000121672 548 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm25625-201ENSMUST00000157221 96 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm23829-201ENSMUST00000157392 270 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Mir3103-201ENSMUST00000175474 67 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm23725-201ENSMUST00000177876 107 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm25457-201ENSMUST00000179509 107 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Mir7678-201ENSMUST00000185076 71 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm43676-201ENSMUST00000197532 540 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm44870-201ENSMUST00000207291 357 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Mir107-201ENSMUST00000083660 87 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.39□□□□□ -2.19
Trbv1A0A0B4J1G7 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm25507-201ENSMUST00000116981 144 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm13885-201ENSMUST00000117569 187 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm13433-201ENSMUST00000121701 240 ntBASIC1.38□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm22227-201ENSMUST00000157356 259 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms