Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gm14972-201ENSMUST00000121780 364 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Gm22027-201ENSMUST00000122737 127 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Gm16265-201ENSMUST00000134558 108 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Gm22551-201ENSMUST00000157795 103 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Gm22515-201ENSMUST00000158273 305 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Gm27245-201ENSMUST00000184385 376 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Gm29167-201ENSMUST00000190024 377 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Gm42570-201ENSMUST00000195937 292 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Trav15d-3-201ENSMUST00000198604 167 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Trav15n-3-201ENSMUST00000200498 168 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Gm44254-201ENSMUST00000204184 322 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Gm44865-201ENSMUST00000207240 531 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Gm18160-201ENSMUST00000214279 827 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 AC154552.4-201ENSMUST00000222171 151 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 AC139294.2-201ENSMUST00000227159 285 ntBASIC0.35□□□□□ -2.35
Trav4n-4A0A075B615 Mir695-201ENSMUST00000102261 109 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm23836-201ENSMUST00000104434 129 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm24068-201ENSMUST00000104513 132 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm15090-201ENSMUST00000118787 1196 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm15162-201ENSMUST00000119325 283 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm14852-201ENSMUST00000120065 647 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm15089-201ENSMUST00000122332 1196 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm23956-201ENSMUST00000157211 119 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm26236-201ENSMUST00000175536 137 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm28912-201ENSMUST00000189001 234 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm43250-201ENSMUST00000196536 273 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm9236-201ENSMUST00000196892 587 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm44465-201ENSMUST00000199536 114 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 AC154730.1-201ENSMUST00000227874 816 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm23102-201ENSMUST00000083724 116 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Snord7-201ENSMUST00000083781 97 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 AC124456.1-201ENSMUST00000217391 2597 ntBASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
Trav4n-4A0A075B615 Gm23010-201ENSMUST00000104151 126 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Gm12512-201ENSMUST00000119620 217 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Gm12825-201ENSMUST00000120249 563 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Mir1942-201ENSMUST00000157274 63 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Gm23854-201ENSMUST00000158378 108 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Mir7068-201ENSMUST00000183439 74 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Mir6335-201ENSMUST00000184081 98 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Mir7017-201ENSMUST00000184894 62 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Gm29134-201ENSMUST00000186579 126 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Gm28337-201ENSMUST00000190425 666 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Gm31123-201ENSMUST00000192094 666 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Igkv4-65-201ENSMUST00000196986 358 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Snora34-201ENSMUST00000083402 138 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.33□□□□□ -2.36
Trav4n-4A0A075B615 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm23766-201ENSMUST00000103894 80 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm25832-201ENSMUST00000104140 130 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm22488-201ENSMUST00000116811 127 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm14358-201ENSMUST00000118458 403 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm17377-201ENSMUST00000165184 207 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm26365-201ENSMUST00000179177 94 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm26968-201ENSMUST00000182894 481 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm42533-201ENSMUST00000196247 157 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm9251-201ENSMUST00000197202 628 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm45101-201ENSMUST00000208327 232 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 AL669916.3-201ENSMUST00000213855 94 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 AL669916.6-201ENSMUST00000214610 94 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 AL669916.4-201ENSMUST00000215976 94 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 AL669916.1-201ENSMUST00000217640 94 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm23517-201ENSMUST00000082830 192 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Snord32a-201ENSMUST00000083285 83 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm25578-201ENSMUST00000083406 104 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.32□□□□□ -2.36
Trav4n-4A0A075B615 Gm14600-201ENSMUST00000121032 630 ntBASIC0.31□□□□□ -2.36
Trav4n-4A0A075B615 Gm11471-201ENSMUST00000121824 198 ntBASIC0.31□□□□□ -2.36
Trav4n-4A0A075B615 Gm11358-201ENSMUST00000122310 373 ntBASIC0.31□□□□□ -2.36
Trav4n-4A0A075B615 Gm24942-201ENSMUST00000158328 114 ntBASIC0.31□□□□□ -2.36
Trav4n-4A0A075B615 Gm24388-201ENSMUST00000177872 107 ntBASIC0.31□□□□□ -2.36
Trav4n-4A0A075B615 Gm22111-201ENSMUST00000178010 79 ntBASIC0.31□□□□□ -2.36
Trav4n-4A0A075B615 Gm23687-201ENSMUST00000178664 79 ntBASIC0.31□□□□□ -2.36
Trav4n-4A0A075B615 Gm24566-201ENSMUST00000179286 79 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms