Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm29165-201ENSMUST00000190655 664 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm29211-201ENSMUST00000191470 664 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm38261-201ENSMUST00000192608 316 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm29950-201ENSMUST00000195273 237 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm6059-201ENSMUST00000196903 340 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm3724-201ENSMUST00000197957 349 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm7214-201ENSMUST00000222428 272 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm25698-201ENSMUST00000082897 107 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.86□□□□□ -2.11
Upk3aQ9JKX8 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm15215-201ENSMUST00000117773 489 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm12872-201ENSMUST00000121835 320 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm22389-201ENSMUST00000158193 301 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm22841-201ENSMUST00000158443 62 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Snord11-201ENSMUST00000158468 84 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm23059-201ENSMUST00000158978 107 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm23379-201ENSMUST00000180026 107 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm27919-201ENSMUST00000185163 107 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm27959-201ENSMUST00000185172 111 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm28597-201ENSMUST00000187664 666 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm43865-201ENSMUST00000204721 127 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm44938-201ENSMUST00000208614 427 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm18991-201ENSMUST00000209225 746 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm45252-201ENSMUST00000211579 397 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm24150-201ENSMUST00000082759 104 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm23093-201ENSMUST00000083450 102 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Mir300-201ENSMUST00000083485 79 ntBASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Upk3aQ9JKX8 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Mir669p-2-201ENSMUST00000103868 87 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Mir669p-1-201ENSMUST00000103884 87 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Gm26474-201ENSMUST00000116762 122 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Gm13728-201ENSMUST00000117471 400 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Gm7164-201ENSMUST00000117503 450 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Gm15211-201ENSMUST00000118932 528 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Gm24885-201ENSMUST00000158783 270 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Gm27991-201ENSMUST00000184804 137 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Mir7226-201ENSMUST00000184953 60 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Gm42672-201ENSMUST00000197821 352 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Gm44870-201ENSMUST00000207291 357 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Gm18113-201ENSMUST00000220630 303 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Gm25859-201ENSMUST00000083710 91 ntBASIC1.84□□□□□ -2.11
Upk3aQ9JKX8 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm11935-201ENSMUST00000118608 399 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm12934-201ENSMUST00000119221 343 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm11891-201ENSMUST00000121241 619 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm13409-201ENSMUST00000122072 546 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Trav20-201ENSMUST00000142754 347 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm23469-201ENSMUST00000157131 104 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm27396-201ENSMUST00000157708 58 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm8151-201ENSMUST00000184817 871 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm37658-201ENSMUST00000192672 315 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm8747-201ENSMUST00000195392 751 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm43245-201ENSMUST00000197603 468 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm18453-201ENSMUST00000208000 626 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm18854-201ENSMUST00000211196 329 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm25813-201ENSMUST00000082748 191 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Mir301-201ENSMUST00000083655 86 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.83□□□□□ -2.12
Upk3aQ9JKX8 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Upk3aQ9JKX8 Gm13378-201ENSMUST00000117483 336 ntBASIC1.82□□□□□ -2.12
Upk3aQ9JKX8 Gm12225-201ENSMUST00000117995 298 ntBASIC1.82□□□□□ -2.12
Upk3aQ9JKX8 Gm14293-201ENSMUST00000118528 577 ntBASIC1.82□□□□□ -2.12
Upk3aQ9JKX8 Gm6444-201ENSMUST00000119611 458 ntBASIC1.82□□□□□ -2.12
Upk3aQ9JKX8 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.82□□□□□ -2.12
Upk3aQ9JKX8 Gm23184-201ENSMUST00000122594 131 ntBASIC1.82□□□□□ -2.12
Upk3aQ9JKX8 Gm25559-201ENSMUST00000157182 74 ntBASIC1.82□□□□□ -2.12
Upk3aQ9JKX8 Gm23332-201ENSMUST00000157424 275 ntBASIC1.82□□□□□ -2.12
Upk3aQ9JKX8 Gm24438-201ENSMUST00000157893 115 ntBASIC1.82□□□□□ -2.12
Upk3aQ9JKX8 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Upk3aQ9JKX8 Gm24418-201ENSMUST00000177597 79 ntBASIC1.82□□□□□ -2.12
Upk3aQ9JKX8 Gm23725-201ENSMUST00000177876 107 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 125.7 ms