Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.08□□□□□ -1.92
Copb1Q9JIF7 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.08□□□□□ -1.92
Copb1Q9JIF7 Gm45207-201ENSMUST00000207469 145 ntBASIC3.08□□□□□ -1.92
Copb1Q9JIF7 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.08□□□□□ -1.92
Copb1Q9JIF7 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.08□□□□□ -1.92
Copb1Q9JIF7 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.08□□□□□ -1.92
Copb1Q9JIF7 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.08□□□□□ -1.92
Copb1Q9JIF7 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.08□□□□□ -1.92
Copb1Q9JIF7 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.08□□□□□ -1.92
Copb1Q9JIF7 Gm26457-201ENSMUST00000082678 78 ntBASIC3.08□□□□□ -1.92
Copb1Q9JIF7 Gm26066-201ENSMUST00000083385 109 ntBASIC3.08□□□□□ -1.92
Copb1Q9JIF7 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Copb1Q9JIF7 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Copb1Q9JIF7 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Copb1Q9JIF7 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Gm11935-201ENSMUST00000118608 399 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Gm11388-201ENSMUST00000120908 159 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Gm22026-201ENSMUST00000122735 281 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Gm14562-201ENSMUST00000129885 543 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Gm24443-201ENSMUST00000157242 132 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Gm22330-201ENSMUST00000158068 115 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Gm17186-201ENSMUST00000171742 456 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Mir6917-201ENSMUST00000184111 61 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Gm28282-201ENSMUST00000186072 186 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Gm45273-201ENSMUST00000211559 281 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.07□□□□□ -1.92
Copb1Q9JIF7 AC165092.3-201ENSMUST00000223602 282 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Gm25793-201ENSMUST00000083287 107 ntBASIC3.07□□□□□ -1.92
Copb1Q9JIF7 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Copb1Q9JIF7 Gm14518-201ENSMUST00000117351 542 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm14551-201ENSMUST00000120802 256 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm15986-201ENSMUST00000122153 400 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm14629-201ENSMUST00000122428 144 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm22322-201ENSMUST00000157151 111 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm24858-201ENSMUST00000158058 323 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm23542-201ENSMUST00000158208 96 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm24885-201ENSMUST00000158783 270 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm28288-201ENSMUST00000191019 214 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm7871-201ENSMUST00000195346 618 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm43510-201ENSMUST00000197922 353 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm44223-201ENSMUST00000204854 114 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
Copb1Q9JIF7 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC3.06□□□□□ -1.92
Copb1Q9JIF7 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm26447-201ENSMUST00000082448 129 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm22249-201ENSMUST00000082485 136 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.06□□□□□ -1.92
Copb1Q9JIF7 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Gm23142-201ENSMUST00000101848 105 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Gm26240-201ENSMUST00000101893 105 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Gm14593-201ENSMUST00000119948 294 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Gm14298-201ENSMUST00000139032 237 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Gm16356-201ENSMUST00000143300 169 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Gm25184-201ENSMUST00000157753 163 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Gm24959-201ENSMUST00000157924 146 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Gm24681-201ENSMUST00000158760 107 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Gm25162-201ENSMUST00000158906 159 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Gm28650-201ENSMUST00000188413 411 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Gm44393-201ENSMUST00000197418 138 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Gm43914-201ENSMUST00000203592 594 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Gm44055-201ENSMUST00000204376 247 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.05□□□□□ -1.92
Copb1Q9JIF7 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.05□□□□□ -1.92
Copb1Q9JIF7 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Copb1Q9JIF7 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Copb1Q9JIF7 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Copb1Q9JIF7 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Copb1Q9JIF7 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Copb1Q9JIF7 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.04□□□□□ -1.92
Copb1Q9JIF7 Gm23941-201ENSMUST00000101953 107 ntBASIC3.04□□□□□ -1.92
Copb1Q9JIF7 Gm22939-201ENSMUST00000103958 131 ntBASIC3.04□□□□□ -1.92
Copb1Q9JIF7 Gm9850-201ENSMUST00000117916 227 ntBASIC3.04□□□□□ -1.92
Copb1Q9JIF7 Gm11285-201ENSMUST00000118443 322 ntBASIC3.04□□□□□ -1.92
Copb1Q9JIF7 Gm15936-201ENSMUST00000118706 460 ntBASIC3.04□□□□□ -1.92
Copb1Q9JIF7 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC3.04□□□□□ -1.92
Copb1Q9JIF7 Gm16218-201ENSMUST00000155424 388 ntBASIC3.04□□□□□ -1.92
Copb1Q9JIF7 Gm24787-201ENSMUST00000157380 123 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms