Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm25863-201ENSMUST00000158249 329 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Gm5277-201ENSMUST00000164923 556 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Gm27878-201ENSMUST00000184000 106 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Gm28151-201ENSMUST00000189404 951 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Gm28648-201ENSMUST00000190092 343 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 CT025538.2-201ENSMUST00000226083 772 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Gm22062-201ENSMUST00000082563 107 ntBASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Ccdc43Q9CR29 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Gm23331-201ENSMUST00000157423 108 ntBASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Gm24237-201ENSMUST00000157790 132 ntBASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Gm24901-201ENSMUST00000158125 110 ntBASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Gm25658-201ENSMUST00000158472 128 ntBASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Gm11392-201ENSMUST00000181419 710 ntBASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Gm6059-201ENSMUST00000196903 340 ntBASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Gm43587-201ENSMUST00000199590 204 ntBASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Mir691-201ENSMUST00000199719 78 ntBASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Gm45071-201ENSMUST00000205353 571 ntBASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Gm45013-201ENSMUST00000206883 178 ntBASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Gm45386-201ENSMUST00000210194 218 ntBASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Gm25859-201ENSMUST00000083710 91 ntBASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Ccdc43Q9CR29 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Ccdc43Q9CR29 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Ccdc43Q9CR29 Gm7164-201ENSMUST00000117503 450 ntBASIC2.28□□□□□ -2.04
Ccdc43Q9CR29 Gm24481-201ENSMUST00000157210 102 ntBASIC2.28□□□□□ -2.04
Ccdc43Q9CR29 Gm24857-201ENSMUST00000158061 310 ntBASIC2.28□□□□□ -2.04
Ccdc43Q9CR29 Gm24573-201ENSMUST00000175499 112 ntBASIC2.28□□□□□ -2.04
Ccdc43Q9CR29 Gm29604-201ENSMUST00000187176 163 ntBASIC2.28□□□□□ -2.04
Ccdc43Q9CR29 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Ccdc43Q9CR29 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC2.28□□□□□ -2.04
Ccdc43Q9CR29 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.28□□□□□ -2.04
Ccdc43Q9CR29 Mir301-201ENSMUST00000083655 86 ntBASIC2.28□□□□□ -2.04
Ccdc43Q9CR29 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.28□□□□□ -2.04
Ccdc43Q9CR29 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Gm22771-201ENSMUST00000104449 91 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Gm25507-201ENSMUST00000116981 144 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Gm24010-201ENSMUST00000157731 282 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Mir3092-201ENSMUST00000174954 96 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Gm22800-201ENSMUST00000175627 94 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Gm8151-201ENSMUST00000184817 871 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Gm37533-201ENSMUST00000193848 545 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Gm44564-201ENSMUST00000207985 180 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Gm17990-201ENSMUST00000211728 553 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 AC116465.1-201ENSMUST00000220324 235 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Gm25475-201ENSMUST00000082825 180 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Gm26126-201ENSMUST00000083188 164 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Gm22577-201ENSMUST00000083731 109 ntBASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.27□□□□□ -2.05
Ccdc43Q9CR29 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Ccdc43Q9CR29 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.26□□□□□ -2.05
Ccdc43Q9CR29 Gm11358-201ENSMUST00000122310 373 ntBASIC2.26□□□□□ -2.05
Ccdc43Q9CR29 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.26□□□□□ -2.05
Ccdc43Q9CR29 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.26□□□□□ -2.05
Ccdc43Q9CR29 Gm25163-201ENSMUST00000158905 104 ntBASIC2.26□□□□□ -2.05
Ccdc43Q9CR29 Mir28b-201ENSMUST00000175399 80 ntBASIC2.26□□□□□ -2.05
Ccdc43Q9CR29 Gm25933-201ENSMUST00000178943 108 ntBASIC2.26□□□□□ -2.05
Ccdc43Q9CR29 Gm23963-201ENSMUST00000179603 77 ntBASIC2.26□□□□□ -2.05
Ccdc43Q9CR29 Gm27755-201ENSMUST00000184623 132 ntBASIC2.26□□□□□ -2.05
Ccdc43Q9CR29 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.26□□□□□ -2.05
Ccdc43Q9CR29 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc43Q9CR29 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc43Q9CR29 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Gm14823-201ENSMUST00000117698 238 ntBASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Gm14766-201ENSMUST00000121689 367 ntBASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Mir6355-201ENSMUST00000183687 106 ntBASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Gm27722-201ENSMUST00000183908 76 ntBASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Gm7837-201ENSMUST00000190873 412 ntBASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Gm37658-201ENSMUST00000192672 315 ntBASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Gm43582-201ENSMUST00000196149 343 ntBASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Gm25853-201ENSMUST00000082793 132 ntBASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Gm25402-201ENSMUST00000082966 131 ntBASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Mir107-201ENSMUST00000083660 87 ntBASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
Ccdc43Q9CR29 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms