Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 AC153541.1-201ENSMUST00000213786 294 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Gm25586-201ENSMUST00000082499 112 ntBASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Sf3b1Q99NB9 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm14670-201ENSMUST00000117327 337 ntBASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm14774-201ENSMUST00000117857 536 ntBASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm14748-201ENSMUST00000119819 411 ntBASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm23184-201ENSMUST00000122594 131 ntBASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm5277-201ENSMUST00000164923 556 ntBASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm27490-201ENSMUST00000184754 128 ntBASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm44182-201ENSMUST00000204052 115 ntBASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm22620-201ENSMUST00000082700 133 ntBASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Sf3b1Q99NB9 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 Gm23202-201ENSMUST00000104376 129 ntBASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 Gm13378-201ENSMUST00000117483 336 ntBASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 Gm23212-201ENSMUST00000122718 60 ntBASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 Gm24478-201ENSMUST00000157439 158 ntBASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 Gm24315-201ENSMUST00000177835 127 ntBASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 Mir7225-201ENSMUST00000184178 54 ntBASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 Gm28404-201ENSMUST00000190242 453 ntBASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 Gm18991-201ENSMUST00000209225 746 ntBASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 Gm25698-201ENSMUST00000082897 107 ntBASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 Gm24044-201ENSMUST00000083107 156 ntBASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 Gm23093-201ENSMUST00000083450 102 ntBASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Sf3b1Q99NB9 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 Snord11-201ENSMUST00000158468 84 ntBASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 Gm25996-201ENSMUST00000175393 117 ntBASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 Mir7678-201ENSMUST00000185076 71 ntBASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 Gm37119-201ENSMUST00000195691 389 ntBASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 Gm43510-201ENSMUST00000197922 353 ntBASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 Gm44408-201ENSMUST00000200205 66 ntBASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 AC124542.1-201ENSMUST00000205588 908 ntBASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 Mir93-201ENSMUST00000083593 88 ntBASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.04□□□□□ -2.08
Sf3b1Q99NB9 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.03□□□□□ -2.08
Sf3b1Q99NB9 Mdga2-203ENSMUST00000113942 423 ntBASIC2.03□□□□□ -2.08
Sf3b1Q99NB9 Gm12779-201ENSMUST00000121496 143 ntBASIC2.03□□□□□ -2.08
Sf3b1Q99NB9 Gm24885-201ENSMUST00000158783 270 ntBASIC2.03□□□□□ -2.08
Sf3b1Q99NB9 Gm24862-201ENSMUST00000179103 79 ntBASIC2.03□□□□□ -2.08
Sf3b1Q99NB9 Gm23310-201ENSMUST00000179105 79 ntBASIC2.03□□□□□ -2.08
Sf3b1Q99NB9 Gm25461-201ENSMUST00000179293 79 ntBASIC2.03□□□□□ -2.08
Sf3b1Q99NB9 Gm43427-201ENSMUST00000198188 331 ntBASIC2.03□□□□□ -2.08
Sf3b1Q99NB9 Gm35558-203ENSMUST00000222264 204 ntBASIC2.03□□□□□ -2.08
Sf3b1Q99NB9 Gm23246-201ENSMUST00000083371 67 ntBASIC2.03□□□□□ -2.08
Sf3b1Q99NB9 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Sf3b1Q99NB9 Gm25377-201ENSMUST00000104334 129 ntBASIC2.02□□□□□ -2.09
Sf3b1Q99NB9 Gm13409-201ENSMUST00000122072 546 ntBASIC2.02□□□□□ -2.09
Sf3b1Q99NB9 Gm25454-201ENSMUST00000157947 315 ntBASIC2.02□□□□□ -2.09
Sf3b1Q99NB9 Mir6352-201ENSMUST00000184495 116 ntBASIC2.02□□□□□ -2.09
Sf3b1Q99NB9 Gm28648-201ENSMUST00000190092 343 ntBASIC2.02□□□□□ -2.09
Sf3b1Q99NB9 Gm18296-201ENSMUST00000192475 783 ntBASIC2.02□□□□□ -2.09
Sf3b1Q99NB9 Gm44794-201ENSMUST00000206550 411 ntBASIC2.02□□□□□ -2.09
Sf3b1Q99NB9 Gm44938-201ENSMUST00000208614 427 ntBASIC2.02□□□□□ -2.09
Sf3b1Q99NB9 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC2.02□□□□□ -2.09
Sf3b1Q99NB9 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.02□□□□□ -2.09
Sf3b1Q99NB9 AC154484.1-201ENSMUST00000227311 771 ntBASIC2.02□□□□□ -2.09
Sf3b1Q99NB9 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Sf3b1Q99NB9 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 Gm26102-201ENSMUST00000157251 284 ntBASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 Gm22037-201ENSMUST00000157280 296 ntBASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 Gm24394-201ENSMUST00000158141 123 ntBASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 Gm26024-201ENSMUST00000158657 322 ntBASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 Gm20689-201ENSMUST00000176033 279 ntBASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 Gm21978-201ENSMUST00000179696 377 ntBASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 Gm29231-201ENSMUST00000179850 319 ntBASIC2.01□□□□□ -2.09
Sf3b1Q99NB9 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms